Detailed information of Hgig_15801 in Hirondellea gigas Gene info
Gene IDAnnotationChromosomeStartEndStrand
Hgig_15801RIBONUCLEASEChromosome15349341012349612548-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00175NAD_binding_1Oxidoreductase NAD-binding domain DomainInterproscan
PF00258Flavodoxin_1FlavodoxinDomainInterproscan
PF00667FAD_binding_1FAD binding domainDomainInterproscan
PF00773RNBRNB domainDomainInterproscan
PF13638PIN_4PIN domainDomainInterproscan
PF17216Rrp44_CSD1Rrp44-like cold shock domainDomainInterproscan
PF17849OB_Dis3Dis3-like cold-shock domain 2 (CSD2)DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001094DomainFlavodoxin-likeInterproscan
IPR001433DomainOxidoreductase FAD/NAD(P)-bindingInterproscan
IPR001709DomainFlavoprotein pyridine nucleotide cytochrome reductaseInterproscan
IPR001900DomainRibonuclease II/RInterproscan
IPR002716DomainPIN domainInterproscan
IPR003097DomainSulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-bindingInterproscan
IPR008254DomainFlavodoxin/nitric oxide synthaseInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR017927DomainFAD-binding domain, ferredoxin reductase-typeInterproscan
IPR017938Homologous_superfamilyRiboflavin synthase-like beta-barrelInterproscan
IPR023173Homologous_superfamilyNADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamilyInterproscan
IPR029039Homologous_superfamilyFlavoprotein-like superfamilyInterproscan
IPR033771DomainRrp44-like cold shock domainInterproscan
IPR039261Homologous_superfamilyFerredoxin-NADP reductase (FNR), nucleotide-binding domainInterproscan
IPR041505DomainDis3-like cold-shock domain 2Interproscan
IPR050180FamilyRNR RibonucleaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23355RIBONUCLEASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000176Cellular Componentnuclear exosome (RNase complex)Interproscan
GO:0000177Cellular Componentcytoplasmic exosome (RNase complex)Interproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004519Molecular Functionendonuclease activityInterproscan
GO:0004540Molecular FunctionRNA nuclease activityInterproscan
GO:0010181Molecular FunctionFMN bindingInterproscan
GO:0016075Biological ProcessrRNA catabolic processInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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