Detailed information of Hgig_14116 in Hirondellea gigas Gene info
Gene IDAnnotationChromosomeStartEndStrand
Hgig_14116POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1Chromosome13390953351391247883-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04857CAF1CAF1 family ribonucleaseFamilyInterproscan
PF06090Ins_P5_2-kinInositol-pentakisphosphate 2-kinaseFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR006941FamilyRibonuclease CAF1Interproscan
IPR009286FamilyInositol-pentakisphosphate 2-kinaseInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR043001Homologous_superfamilyInositol-pentakisphosphate 2-kinase, N-terminal lobeInterproscan
IPR051181FamilyCAF1 family poly(A)-specific ribonucleasesInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15092POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004535Molecular Functionpoly(A)-specific ribonuclease activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0035299Molecular Functioninositol-1,3,4,5,6-pentakisphosphate 2-kinase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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