Gene detail

Detailed information of Hgig_08292 in Hirondellea gigas Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Hgig_08292	PROTEIN CBG20824	Chromosome8	96733780	96742654	-

Gene Structure

More details in Jbrowse Sequence

CDS

Hgig_08292

ATGGAGGAACTCCTGACGTGCTCCGTGTGCTGTGAGAGGTACTGTGAGGTTGACCGACAGCCTGTACTGCTGCCTCGGTGTGGCCACTCGTTCTGCCGCCCCTGCGTCACGCTCCTGCTCTCCGGTGGCACCATCATCTGCCCCACGTGTCGCACAGACCAGAGGGTGGAGTCCGCACATAGGCTACCTACAGAGTTCACGCTTCTGGCTATCATAGCGGCTCAGGAAAACTCAAAGCTAGACAACTGTCGCCGCCATGAGGTCAAGTTATCGTTCTGGTGCAAGACTTGTGGGCAACCCACCTGCGGCGAGTGCCTGTTCGAGGACCACCCCACGCACAGCCACTGCGTTATTCGCTCCACTACATACATCCAAAACATCAAGGACAGCGTGCATGAGGTGGCTTGCAAGTTCATGGATGCTTTGGACACGAGGGAGCAAAGCTTCTACACAACAGTCTATTTATCCGCTAAAAAGATTGACGATGTACTACGGAATGTGACAGTATTAAGGAAGGACATGGCCGAAGCTCGAGAACTTATGAAGGGCATCAAAGAAGAAGATACCAGCATCAGCACAGCGACGTCGCTGGCAGAAGCCGCTAAATACCTCGGCCTAAAGTGGAACATTCAGGACGCTAACTTCAACAGACCCCAAGAAGTGGAGAAATCACAAGATAGGAAAGAATCCACTAGTGAAGATAAAGAAGATGTGAAGAAGGAAAAGGTGATAAAGAAAAAGAAAAAATCGATTGCTGAGAAAGAAACAAATAAAGAAGAAGAAAAAACAGAAGAGATCAAAGAAGAGAAAGTAGAAGAACCCAAGAGAGCAGTAACTCCTGAACCAGTGATTCAACCAGAAGATGAAACGGCAAAAGAAATCAAACGAAAAGCATCCTTACGAAAATCCAAAACATTGTCAGTATTTGAACCATTTAGTATGAACAAAGAAATATCAGATATAAAAGAAAAAATAGTCGAATTGGACAACAAGGAACGAGAAAGAATTGAAATGGAAAATTTACAGCGAATTGAGGAAGAAGAGCAAGAGGTCTCAGATAAAAAGTTATTAGAAACGAAGAGTGAAGAAGCGAGAAAAGAAGCGGAAGAGCTTGTTGCGGCAGTGGAAGCTAAGACAAACGCTATAGAAGAAGAGGTACGAAAAAAAGTTGAAGCCGAAGCCGAAGAAGCTAATAAAAAAGCTGAGGAAGCAAAGAAAAAAGCTGAAGAACAGGACGCGCTAAATAAAGAAGCGGATCTAGAACTTGAAAAGTTAAACGAAATTCTAAAAAGACCGCGAGGAAGGCTCGCACGGAAATACTTAGCGGAAAAACAGAAGCTCGATGCTGAAAATGCTGAAAGAGAAAAAGTTGAAAGAGAAGAAGCCGAACGAGAGAAAGCCGAAAAAGAACAAGCCGAATCAATAAAACTAGAAGACAAAGAGAAGGTTAATGGGGATCCAGAGCATACAGATAAGGATAAAGACAAAGACTGTACCGAGACACAAGCAGAGGCTACTAAAGATAATCCATTCGCTGGAGAACTGACTCTTGAAGAGAAGGAAGCTAACGAAAAGACCAATAAAAAATCAGCAATACAAGGAGCAAATTTACTGGACTTCATGAAGGCGCCTCTCTTTACAATATGCGTGGAAGGCTGTGAAGGAAGATTGGCCCTTCTACAATGGGAACCACAGGGTCTTCATGTTTATTGCCATCAGTACCAGCAACTCCATTACGATATTGCCATTCGGACGACAGTGCTGCACGCTATGATACCATCCAAGAGTCCCTTGGTGTTCCTGGAGCTAACGGTGGGCACAGGAAGAGCTCGTCGTATCTACATAAGGCTGTGGGGCCACCTGAGAAGAGCGCACAACTTCCTGGCCCTCTGTATTGGGGACAAAGGCTCAGCATTTTTGAACACCAAACTCCTCCAGACGTACGACTACGGTGAAGTTGGCGAGAGAATACTTGGTGGAGATTACGAATTTAACTGCGGTCGCGGTGGTTGTGGCTTACTGGATGACCTGGAATGGAACGGCGACTACACCCAGCCCATGAAGGAAGGTCTCATCACCGCCGCCGGGTCTGGACAGCGTGCCACCAACTCGCTCTTCCTTATCTGTACGCGGGACGACGAGAAAAGGAATTTCTCGTGCCCGTTCGGCGAGGTCGTCCAGGGTTTGGATGAAATTAGGAACGCGATCAAGAAGTCCAAGGACACGGAACAAGAAGTCTGGATTACTGAGTGTGGAGTCGTACTTGAACCCCCAAGAGCAATCTGT

Transcript

Hgig_08292

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00097	zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan
PF00643	zf-B_box	B-box zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000315	Domain	B-box-type zinc finger	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR002130	Domain	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR018957	Domain	Zinc finger, C3HC4 RING-type	Interproscan
IPR029000	Homologous_superfamily	Cyclophilin-like domain superfamily	Interproscan
IPR052667	Family	E3 ubiquitin-protein ligase RING-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47156	PROTEIN CBG20824	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000413	Biological Process	protein peptidyl-prolyl isomerization	Interproscan
GO:0003755	Molecular Function	peptidyl-prolyl cis-trans isomerase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-