Gene detail

Detailed information of HK74SY85_g890 in Paraphelliactis xishaensis sp. nov. Gene info

Gene ID	Annotation	Contig	Start	End	Strand
HK74SY85_g890	RING FINGER PROTEIN 32	ctg4	2551345	2555138	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HK74SY85_g890

ATGTGTCGTAAAGACCAATATCAGAAGAGAATTATCCATGAGGGTGCTAAAGAGCACAGGATCAAATGTGCAATCAAGTAAATATCAACATCAACtaaggtggctcgtaccaatttatttgcgcgttggttacatttttaagtcgcgctttacatcgacaaaattgtcaccgatttctgtgatttttaacattctaaataaagaaagtttaaattttaagaacatatgttactcatgtttttgtcagagtaaaaatgtttgagatatcaatggttttcaaaaatcacatttttataataaatggccataatcccaaaattcgaagaccgatttttcccttacttcagcaaataagcctcaaagctctgaggttttgtccttgatatgtttcatggcaataatgaccatacaactcactgcacaaatgctagttaaattcactatgaccatgcaatgctaaataatgcaattgctgttagttgacacacaaataacggaggattgcagccagactatctccaatcttaaaggcgaatgatatcccaagctttatcagaaagaaactaaGTaatcagaaacaacaaacacagcctgcactaaaagaagcagtattttatgctgcatgcaagacgaaattacatatcttattttcattcgacttattgcgtattagttcctacatgtccaaaaaaaatcatagcatgacaaaatacagtatctatggaaaacccttaccaattttcagtatcataggttccctttccgaggagaaataaagccgccagtcgagtacttctaactatctgccattcagctgaaatgaaaacatttttgcttgataatatattcaagacttctggatttgttgtcacattcctcacgggcagttggtggactctttggttggtttttctgctggttcgctcgttatcccctagtggccagcgctcgtgaggaatgtaacagcaaacttagagattttgaatatgttagtcaggcaaaaatgttttcatttcagctgaatgcgggtgtaataataataataataacaactttattttacgagggtaacacataacagtttacactgatgaactagtggccctcaaaaaagaagtactcgacttggtggctttatttctcctcgaaaagaggacctacgatactgaaaattgtaagggttttccatagatactgtattttgtaatgctaagattattttggaacataaaataactaatacgcgttacgtcgagtgaatataagatatgtaagtttgccttgcatgcagcataaaatactgcttcttttagcgctgactgtatttcttgtaagtttctgattGCttagtttctttccgataaaacttggaatagcattagcctttaggaatggaggtactagtctggatgaaatcctctgctatttgtgtgtcagctagcggcaaagcattagtattgaatgatcgtagtaaatttaactagcatttcgtgcagcgagttgtatggtcattattgccatgaaacagatcagggacaaaaccacagagctttgaggcttatttgctgaagtaaggaaaaaatcggtcttcggatttcggtattatggccatttattgtaaaaatgtgatttttgaaaaccgttgatatctcaaacatttttactccgacacaaacctgagtaagatgttcttaaaattcaaactttctttatttagattgttttaaatcacagaaatcggttaaagttttgtcgatgtaaagcgcaactcaaaaatgtaaccaacgcgcaaataaattggtacgagccaccttaaATGCCTGTGTTTTCTTTCAAATCCAAGCTTCATATGGTGGTCTACTCTCATTTATATAGAATCCAAGCTGCTTGGAGGGGTTATGTTGTACACTCTTGGTACAAGAACTTGAGACAAACTGTGGCACCAAATGATCCTGATCTAAGGAAGAAATTCTATGAGGATAAGGTAAATGGCAAGCATTTCACATGTATCTTGTGTCATTAATTAAATGAAAAATAATAGGGTCATTTTCCAGTTAGGTTTTATACCCTAGAAGTAGGTTCACTATGCACAGACACACAGGAGAGGGTATCATGACTAACATAATCAACTTCTAATTTTAGCTACatgtacacctaattgcaagaacgttgtcatataaaaaagacattttgccaaataggaattaattaaaagacaatagcagagcactcaagctgaacttatccttttgtcttttaattaattcctatttggcaaaatgtcttttttatatgacaacgttcttgcaattaggtgtatatTGCCAGTTAGAAATTGTAAAAGTATCAAGGAAATAGATGAGCTTTGTATTCatatattccattttactatgtactcttatagatgcttatagatggtgtcaaaatgttgtcagaacaaaaGTCTACAACATGTACAAAGTTAATACATAATCTATGATGCCTCATGCCTTCGTGTTATTAGATAATCTAATAATGTATTTTGTAATTTTGCCATGCATATTAATTAATACAGTTTTTGTCATCAACAGCTACAAAGTATCACAGACCATCTTGTCTGCTCAACTGAAGCCAATAGTCAGAGCGTTGATGACTTGATGTGTGAAATAGATCAATCCATTGCCAGCAGCAGAAATATAATGAGGTAAATATATTTGCATGTCATAGTCAGTTATtaccctgggtcaccagaggttcctaattctcctctcttcacgactcacacaaaaattatgagagggggattaggaatccctggtacccagggtaaggagcaagtgtggcttagtcagtacatgcgctgcctgctaaacgagaggtcagtagttcgatcctcggtgacatcacacatttgtttcgacttctttctaatccgtgtatctcagttgagctttaaatacccataaaccggagcactgatagaaagaggggagtaaagtgcacaccgtcggcctcaagtttatcagttgaattgctgtcataagctaccgactttaaataaggttgatttacttttttgctttactttgctttactttgctttaAGTCAGTTAGTCAGACTTTCATAATAACTTCCCTGTTCAAACTTCTTTTCAGACAAGTGTGTGATGATCATTTTAGTTTTATTACTGATGATGAGTGGGAGCAGATACAGCTAAAGGTGAGTGAATTTTGCCTTATAATAATTACCCTGCATAGATCTGGGAGGAGAGATGATAGTGTCACCTTtccctcctcctcttccacaccccaataccacccacccccccccccccccccccccccacccccacccccTAGTCCAAGCTCATCATTATAAAAAGTTAAAGATATTTTAGTGGACTTGCTATATATAATAAGGTTCCCTGCCAGCAGAGTCCATTGTTCTTTTATTTGCCTCAATATTAAGATGGGGACATTGGTTACCTGCAAGGGCAGTCTCTTTTACCCCAAAGGAAACACAGGTTATGAAAGGGCTAGCCGAGCATTGCCTTTAATGAGTATTATCTATGTCCTAGGCAGTTGAACGCTGTAGCTTAGAGTGTCCTATCTGCATCACGCCATTATCCCAACAAGGACTGTTCAAAGATGGTGTAATTGGGCGTGGTACAACACATGGTACAACACGACCAACTGTTCTGCTTTCTTGTTCGCACGTGTTTCATGTCACGTGTATCGAAGCCTTTGAAGAGTTTACTGTAAACCAACGACACGTGTGTCCAGTTTGTAGATCGACGTACTCTAAAAAGACAATTATGTGTCGTAAAGACCAATATCAGAAGAGAATTATCCATGAGGGTGCTAAAGAGCACAGGATCAAATGTGCAATCAAAATCCAAGCTGCTTGGAGGGGTTATGTTGTACACTCTTGGTACAAGAACTTGAGACAAACTGTGGCACCAAATGATCCTGATCTAAGGAAGAAATTCTATGAGGATAAGCTACAAAGTATCACAGACCATCTTGTCTGCTCAACTGAAGCCAATAGTCAGAGCGTTGATGACTTGATGTGTGAAATAGATCAATCCATTGCCAGCAGCAGAAATATAATGAGACAAGTGTGTGATGATCATTTTAGTTTTATTACTGATGATGAGTGGGAGCAGATACAGCTAAAGGCAGTTGAACGCTGTAGCTTAGAGTGTCCTATCTGCATCACGCCATTATCCCAACAAGGACTGTTCAAAGATGGTGTAATTGGGCGTGGTACAACACATGGTACAACACGACCAACTGTTCTGCTTTCTTGTTCGCACGTGTTTCATGTCACGTGTATCGAAGCCTTTGAAGAGTTTACTGTAAACCAACGACACGTGTGTCCAGTTTGTAGATCGACGTACTCTAAAAAGACAATT

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00612	IQ	IQ calmodulin-binding motif	Motif	Interproscan
PF12861	zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000048	Binding_site	IQ motif, EF-hand binding site	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR024991	Domain	Anaphase-promoting complex subunit 11, RING-H2 finger	Interproscan
IPR042862	Family	RING finger protein 32	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14991	RING FINGER PROTEIN 32	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005680	Cellular Component	anaphase-promoting complex	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0031145	Biological Process	anaphase-promoting complex-dependent catabolic process	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0097602	Molecular Function	cullin family protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-