Detailed information of HK74SY85_g7655 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg46:1708469...1733139
NR annotation: XP_031563003.1, PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5F450PAN2-PAN3 deadenylation complex catalytic subunit PAN2 OS=Gallus gallus OX=9031 GN=PAN2 PE=2 SV=1
Q504Q3PAN2-PAN3 deadenylation complex catalytic subunit PAN2 OS=Homo sapiens OX=9606 GN=PAN2 PE=1 SV=3
Q8BGF7PAN2-PAN3 deadenylation complex catalytic subunit Pan2 OS=Mus musculus OX=10090 GN=Pan2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13423UCH_1Ubiquitin carboxyl-terminal hydrolaseDomainInterproscan
PF20770PAN2_NPAN2 N-terminalRepeatInterproscan
PF00929RNase_TExonucleaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR028881DomainPAN2, UCH domainInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR048841DomainPAN2-PAN3 deadenylation complex catalytic subunit PAN2, N-terminalInterproscan
IPR013520DomainExonuclease, RNase T/DNA polymerase IIIInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR050785FamilyPAN2-PAN3 complex catalytic subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15728DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0004535Molecular Functionpoly(A)-specific ribonuclease activityInterproscan
GO:0031251Cellular ComponentPAN complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12571PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2EC:3.1.13.4
Messenger RNA biogenesisko03019deepkoala

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