Detailed information of HK74SY85_g5541 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg28:2317855...2328370
NR annotation: XP_020893791.1, mRNA export factor [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5FVA9mRNA export factor OS=Xenopus tropicalis OX=8364 GN=rae1 PE=2 SV=1
Q7ZWF0mRNA export factor OS=Danio rerio OX=7955 GN=rae1 PE=2 SV=2
Q8C570mRNA export factor OS=Mus musculus OX=10090 GN=Rae1 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10971MRNA EXPORT FACTOR AND BUB3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000972Biological Processtranscription-dependent tethering of RNA polymerase II gene DNA at nuclear peripheryInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0006405Biological ProcessRNA export from nucleusInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14298RAE1, GLE2; mRNA export factor-Chromosome and associated proteinsko03036deepkoala

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