Detailed information of HK74SY85_g5020 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg25:99954...140610
NR annotation: XP_020895418.1, splicing factor 1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q15637Splicing factor 1 OS=Homo sapiens OX=9606 GN=SF1 PE=1 SV=4
Q64213Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=1 SV=6
P0CO45Branchpoint-bridging protein OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=BBP PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00098zf-CCHCZinc knuckleDomainInterproscan
PF16275SF1-HHSplicing factor 1 helix-hairpin domainDomainInterproscan
PF00013KH_1KH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR004087DomainK Homology domainInterproscan
IPR032570DomainSplicing factor 1, helix-hairpin domainInterproscan
IPR047086Homologous_superfamilySplicing factor 1, helix-hairpin domain superfamilyInterproscan
IPR045071FamilyKH domain-containing BBP-likeInterproscan
IPR004088DomainK Homology domain, type 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11208RNA-BINDING PROTEIN RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0048024Biological Processregulation of mRNA splicing, via spliceosomeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13095SF1; splicing factor 1-Spliceosomeko03041deepkoala

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