Gene ID | Annotation | Contig | Start | End | Strand |
---|---|---|---|---|---|
HK74SY85_g4452 | PROTEIN LIN-28 | ctg21 | 4385529 | 4396885 | - |
CDS | |||||
HK74SY85_g4452 | |||||
Transcript |
HK74SY85_g4452 |
Protein |
HK74SY85_g4452 |
Gene family | Subfamily |
---|---|
Transcription Factors Family | CSD |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00071 | Ras | Ras family | Domain | Interproscan |
PF00313 | CSD | 'Cold-shock' DNA-binding domain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR001806 | Family | Small GTPase | Interproscan |
IPR001878 | Domain | Zinc finger, CCHC-type | Interproscan |
IPR002059 | Domain | Cold-shock protein, DNA-binding | Interproscan |
IPR005225 | Domain | Small GTP-binding protein domain | Interproscan |
IPR011129 | Domain | Cold shock domain | Interproscan |
IPR012340 | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
IPR019844 | Domain | Cold-shock (CSD) domain | Interproscan |
IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
IPR036875 | Homologous_superfamily | Zinc finger, CCHC-type superfamily | Interproscan |
IPR051373 | Family | Lin-28 homolog RNA-binding protein | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR46109 | PROTEIN LIN-28 | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
GO:0003729 | Molecular Function | mRNA binding | Interproscan |
GO:0003924 | Molecular Function | GTPase activity | Interproscan |
GO:0005525 | Molecular Function | GTP binding | Interproscan |
GO:0005634 | Cellular Component | nucleus | Interproscan |
GO:0005737 | Cellular Component | cytoplasm | Interproscan |
GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
GO:0031054 | Biological Process | pre-miRNA processing | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |