Detailed information of HK74SY85_g4333 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg21:2667583...2676714
NR annotation: XP_020904049.1, histone-binding protein RBBP7 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3MHL3Histone-binding protein RBBP4 OS=Bos taurus OX=9913 GN=RBBP4 PE=1 SV=3
Q09028Histone-binding protein RBBP4 OS=Homo sapiens OX=9606 GN=RBBP4 PE=1 SV=3
Q60972Histone-binding protein RBBP4 OS=Mus musculus OX=10090 GN=Rbbp4 PE=1 SV=5
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF12265CAF1C_H4-bdHistone-binding protein RBBP4 or subunit C of CAF1 complexRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR050459FamilyWD repeat RBAP46/RBAP48/MSI1Interproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR022052DomainHistone-binding protein RBBP4, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22850WD40 REPEAT FAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0016575Biological Processobsolete histone deacetylationInterproscan
GO:0016581Cellular ComponentNuRD complexInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0035098Cellular ComponentESC/E(Z) complexInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10752RBBP4, HAT2, CAF1, MIS16; histone-binding protein RBBP4-Chromosome and associated proteinsko03036deepkoala

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