Detailed information of HK74SY85_g4114 in Paraphelliactis xishaensis sp. nov. Gene info
Gene IDAnnotationContigStartEndStrand
HK74SY85_g4114SUPERNUMERARY LIMBS, ISOFORM B-RELATEDctg20628618630033+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF12937F-box-likeF-box-likeDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR001810DomainF-box domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR036047Homologous_superfamilyF-box-like domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR053299FamilyASTRA complex-associated WD repeatInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR44156SUPERNUMERARY LIMBS, ISOFORM B-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0051726Biological Processregulation of cell cycleInterproscan
GO:0061136Biological Processregulation of proteasomal protein catabolic processInterproscan
GO:1990756Molecular Functionubiquitin-like ligase-substrate adaptor activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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