Gene detail

Detailed information of HK74SY85_g3468 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg15:1117863...1119858
NR annotation: XP_020910506.1, gem-associated protein 8 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

HK74SY85_g3468

ATGAATCGCTGTCCTTGTTGCCCCGAAACTGGCCATGGAGTGTCATATCCATTCAATCAACATCAAGATCCTGCAACAGCTGCTTTATATAATCAGGCTTTGTACCATTATCAGTCGTATCTTTATTACTGGAGTCTCTATAATACACAGTTTTCCCAGAATCAATCATTATGTGAGTGTTATGAAGACAGAAGAAACAATGTAGAACATTCATCTTTTGAACAACAATCTACAGATTGCCTGGATGTTGGAGAAACATATTCAAGAAGAACATATGCATATCCCACAGAATATAACTCGTataatgatactgatgttaatatggaagtagaaagagatgataataatgaagaacatgatggtaatgatgatgacaatgaAGAGTTTGAGATAGATGAAGGATTTTATCAATTTATAAAACAGTCAGAGAAGCACAGAGAAGAGAGAGAAAGGGGTAAGTTTCAGAGTAATAGGTGTTTATTCATTAGCGGTATTTCCATTATTACAGTTATTTATTAAAACCAACCATATTTAATTTATGGACAAATAATGTTCACCAGAATTGTTACTCCTTTATAACATagagcagatttcctatgagtgtgaaaaacttatggcacggaccatgctgtgctgtgaccatgtcaatgccgtagcttgtatgaaaacattcgaaattccatgccgtgaccatgccCaaggtttaaaataacagctgatcagtggccagacaaatcgttaacatgaacagtcaagcttatttattgactggttaaaatgactggccagtgaaatgtttggctggacaagtgccaattttggccggacattgtccgttgaacggccgttatttttagccttggtgtcgtgccattacccgtgccgtgtgccgtgacttttcacactcatacgaaatctgctctatcaacaaataattattattatTACACCACTGTTGATTTCCATATTCAACTTCCTGGGTACAAACTTTGCTATGAGGTTCTCACCTTTACATTATTTATATTTGTAGCAAAAAGAGCAATGGCAAAAACTGAAGAATATGTTGAAGGTAGGATATACTTCAGTGGGGTTGTATCAAGCAAGGTATCTGGGATCATGTGAATTTTGGAATCAGGATCAAAGTTTTGTAGTTCATGATCTGGCATAAACTaattcaccgattggcccctaaatgggtagtaagcctacttctaatgtcctgagttaagtttagccgttaggacattagaagtaggcttacatagagtactaccctctagaggtcacgtggtgtacttcatgttactgtcaccaaaaagttcggacattgtcattgaattggcgtacaaatgcactaacttttgtacagtttatcgacttgatttagttgttcaattctctaaatactagcaaaactattttatataaggtttataaacaagtgctaatatttagagaatcgaaaaaccaaatcaagtcgataaactgtacaaaagttagtgcgtttgtatatatacggccattcaatgacaatgtccgaacttttacaccacgtgagctctaggggccaatcggtgaattATGGGATCATGGATCAAGTATTTTGCAAATTTTTGGATCAGGGATCTAATACTGGAGCAAAAAAATATGTGACAAATTTCCCTCGTAATGTTGACCCTATACTTACATGATGAAGAAGGGACAAGCTCCTTCAGTCACAACATACCAGTAGTCTATTTAAATTATGCTCCAACCTGACTATGTCCTCTTTTTTCTTCTTTTCTATTTCATTGCTACAGTTGGGAAAAGACAGATTAATGCCAGCACTCTAGCACCAGAGGAACATGAAGAGGCAAAGAGAAAAAAAGCCATGGACACTTTATATGGAGATAAAGCATTGTATATAATGTCATTGGAGGCATCATTACAATTACATTATGACAGACACTTTGATACTAGACAGCCTATATTTTGGCCTAATATACCTTTCAAGTTTATGAATCGCTGTCCTTGTTGCCCCGAAACTGGCCATGGAGTGTCATATCCATTCAATCAACATCAAGATCCTGCAACAGCTGCTTTATATAATCAGGCTTTGTACCATTATCAGTCGTATCTTTATTACTGGAGTCTCTATAATACACAGTTTTCCCAGAATCAATCATTATGTGAGTGTTATGAAGACAGAAGAAACAATGTAGAACATTCATCTTTTGAACAACAATCTACAGATTGCCTGGATGTTGGAGAAACATATTCAAGAAGAACATATGCATATCCCACAGAATATAACTCGTataatgatactgatgttaatatggaagtagaaagagatgataataatgaagaacatgatggtaatgatgatgacaatgaAGAGTTTGAGATAGATGAAGGATTTTATCAATTTATAAAACAGTCAGAGAAGCACAGAGAAGAGAGAGAAAGGGCAAAAAGAGCAATGGCAAAAACTGAAGAATATGTTGAAGTTGGGAAAAGACAGATTAATGCCAGCACTCTAGCACCAGAGGAACATGAAGAGGCAAAGAGAAAAAAAGCCATGGACACTTTATATGGAGATAAAGCATTGTATATAATGTCATTGGAGGCATCATTACAATTACATTATGACAGACACTTTGATACTAGACAGCCTATATTTTGGCCTAATATACCTTTCAAGTTT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15348	GEMIN8	Gemini of Cajal bodies-associated protein 8	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR034754	Family	Gemini of Cajal bodies-associated protein 8	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16238	GEM-ASSOCIATED PROTEIN 8	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000387	Biological Process	spliceosomal snRNP assembly	Interproscan
GO:0032797	Cellular Component	SMN complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13136	GEMIN8; gem associated protein 8	-	Spliceosome	ko03041	deepkoala