Detailed information of HK74SY85_g30228 in Paraphelliactis xishaensis sp. nov. Gene info
Gene IDAnnotationContigStartEndStrand
HK74SY85_g30228POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASEctg965113394118441-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00009GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan
PF00013KH_1KH domainDomainInterproscan
PF00575S1S1 RNA binding domainDomainInterproscan
PF01138RNase_PH3' exoribonuclease family, domain 1DomainInterproscan
PF03725RNase_PH_C3' exoribonuclease family, domain 2DomainInterproscan
PF11987IF-2Translation-initiation factor 2DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000795DomainTranslational (tr)-type GTP-binding domainInterproscan
IPR001247DomainExoribonuclease, phosphorolytic domain 1Interproscan
IPR003029DomainS1 domainInterproscan
IPR004087DomainK Homology domainInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR012162FamilyPolyribonucleotide nucleotidyltransferaseInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR015847DomainExoribonuclease, phosphorolytic domain 2Interproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR023115DomainTranslation initiation factor IF- 2, domain 3Interproscan
IPR027408Homologous_superfamilyPNPase/RNase PH domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036345Homologous_superfamilyExoribonuclease, PH domain 2 superfamilyInterproscan
IPR036456Homologous_superfamilyPolyribonucleotide nucleotidyltransferase, RNA-binding domain superfamilyInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR036925Homologous_superfamilyTranslation initiation factor IF-2, domain 3 superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11252POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0004654Molecular Functionpolyribonucleotide nucleotidyltransferase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0006401Biological ProcessRNA catabolic processInterproscan
GO:0006402Biological ProcessmRNA catabolic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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