Gene detail

Detailed information of HK74SY85_g28751 in Paraphelliactis xishaensis sp. nov. Gene info

Gene ID	Annotation	Contig	Start	End	Strand
HK74SY85_g28751	TENASCIN	ctg687	61054	69339	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HK74SY85_g28751

CTGATTCTCTCGTTACCAAACACAAACGGAACTGTTTATAAAAGTTTTCATACCAGAACGATTTCCCATTGCGTCACAATATGTCGCGCTAAATCGATTACTGACAATTTCATCTACACATCTAATCAAAAGAACTCACAACCACCAGCAAGGTAAGAAACTAATGTAACGCCAGATGGAAAATCATCTGCTATCATTCGTATTATGCCGACAAAAGAAAACTGAAACGATGCGCTGATGTTGTTATGTTTCACTGAAACGAATAGACGACGGGGTTTTTGAAACATTAATATATATCAGGAGCCCATGTGTATATATATATATAAGGTTGTTTGAATAGCGAAGATAAAATATAACGTGCATGTATTAAAGTTGTTAAAGATTGCGTCTCTTCACTTCTTTTCTTTCTTGTCTGGGTTAGTCAAATATTTATCCATGAAGATGTCGAATAGACGAAGGAGCTTTACCGATACAAGGGTTATCTGACGCACTTGTATTGACAAAGGCGTTGAAAACGATCTCCCGGCACCTCAGACGTATAAATCAACACGCGAAATCAAAATCGAAATCACTAGACTGACTGATTTTGTTTCTCAAACTTTCTCTCTTGAAAAGAAAGCAATTATTTTACAATGAAGGACGTGAAAAAAACATTTACAAATTGATAGTTGCAATGATAATTGGATATAACTACATTTATCTTTACTCTGCAGAATGTGGCTAACAGCTATTTTGATTGTTCTACTCGTTAACGAGATATCAATAAGCCAAGCTAAGAGTAAGTAATTTATAACTAGactaggttgcttatcagcagtgaatgctgacggtgaatgtattactcgtagttgtggataaggttttgcgagggaggtagtcattgtgaaatattgatttatgtaagcgcagcgtgaggatagtgacaagtatggaattaggcgactctacctttcttcttttctatagtgtttgtcagtgttccttagtgtggggttatcagagaatagaaataggcaaacaagtattgttcaattgattttcatctggagtgcacatgcgcccctgcgccacaacaaacaatctatcaaacaatcaatgaatttgtattctagttttgagtttattacttatccaatggtctgtaatatcatgtgcactctaatgggccagcatcttggttaatgaatgtgagaaagacttgcaccaagtgcttataaaatgataactagtttttaaatggtcagaacaaatgtcggtacatgattcattttcctttaataactgctctatttgaaaaattggatagtttatgaataactaatgaaatgtaatacaatatacagtaatgtgacatttatttgaatattgtagtttcactcaatgaatgctgttgagagtgaaataaccagcgttaaattcacacctaagcacgcagtcataaatctcaaatacgatcctcaagaaaggtatctatgttgcttacgagttaaaaaacctcaagaaacatacacatgtgcaaaaattagggccacagatctttggcacggcatttaccgatcagaaaagtgaaacttgaatagcaaaacaactcacctcaactttaaacgatgccaaagctgtcagagccaaagagaaagaacgcgtccagtcacatgcttatgtagtagttcgtgcgaaaagcattgtcgttattgaggattgcattgtggttattgagaattgcattgtggttattgagaattgcattgtggttgttggaaattgcatgccgggtagaaatcgagattttaggtcctacgtgatgaaatagaactgcttccttgctcgctcgcttcaggctcgctcgctgcgtcagcaaTGATTGGGAGAGGGGAGGTCAAGGGAAATTATTACCGAGACGTACCACATTAGTGAGGCTTTCAGTTCTTTCCAAATCTTTGGCGAATTAAGGATCAAACCTTTGCTTATCCTTTCTCTTCTTATCTAAAGAAAACGCTCTATCAAAACCATAACCAAAAATGTAATTCTATTATGCGTAAAAGATAGTGATATGAGTCAACGATGCGCCCCTACCTCTCCCCCCACGGCACGGATGCTTCCAGTTTCCAACTCCCCCGCCCCCTCCCCTCCAATGGGATGATATCCTAGCTCTTAGATCTTACATATGACCTACATTTGTAGACGATTAAGTCGATCGAAAGTCTTATATAATGATAATGCTTCCGGAGAACTGCGGCGTTATAAGTCACGGCTTTTCCTTTCTATCCGCTTATGAGGGAATTAGGTAACGCACGTAACTAACCTATGACACGTCGCAAGTCAGAGATGTGCCAAACGCCCgggggggtactctacccaaatttgggtgggggtgtgccgctggggctctgaaacccttaccctgtataagacaaaaaaaatctaatttccataccctgttcaagacaaagtgtgaaattttatatccctctataagacaaataacaaattatctacatgtcaataaagtcgtcggtggtcaggttagaggtcaggaataaactgattgcaaaccgatatctgtcaggtcgatttgtcggtgttgagttccatctgccatttgttctcccaagtgatcaaataccatacccggttcaagatctgtatgtgaaaatggataccctgtctaagaatctaactcgtaaaaaaccataccctgtcagctagatcatccccgtatagtccatatatgggagtacccccccccccccCAGGGGCCAAACGACACGGCACAGTACATGAATGGAGGATGTAGACGTGTGAGATAGGAAGAAATCGTaaagaaaaggaggaagaaggaaagagaaaaggaaagaaaaaagTGATGTTGCTTGAGGCAAAAACAGTGAACATCACGACACAGTGCATGAAATTTTTCACGACCGGCTTTTGCTCttgattgattgattgattgattgattgattgattgattgattgattgaattttgattggttggttgGAACAGGGCTGAAAATGTATACACATAGTTTACTAATTGATTGGTTGGTCGCTAACTTCCCGTGTCACAATACAAAACAGATATATATATATAATTTGTTTTGTTTTTGTTGGATGGCAGTTGAAGAATGAAAAGTACGTATTGTGATTTCGTTTCCCTACAGTTCTTCTGTCTGTCTGTCCTCCCTTCCTTTCTTCTTTGTCAtagcctgcgtagctgggctctcagggaaggagcggaagaagaagggagagggagaggaaaggagggggcggagagggagagcctgcagcgaaacctatgcttttccccttacgccccctatttaacattcaaAAGGCGCGTCAAATTGCATGGAAATTCGAGCCGAACGGCTGTCACTACAATAGGTACTTTACTTTTGATTGCGATTCGATTTGTTATGTCCGGTGAAATTCCTTGTAAAACTCAAAGTAAAAGAGGTcatacatacacacacacatacatacatggtttatttggtaaagcaggttaaataattggcaacacattttgtgctgatgtggtcgaaaatcgattgaaaacaacccaaactccaattgtcgtccgccgcctttgtaagtgcagtcttcttgtacagtttggaagtagtgctttttcaaatcttgtgtgaatcaatttctatattacaaaccaagaaagcatcacaagttgtttgaaatacttgtgctagaaagttaagatttcgtaaagaaagggtttgaccccggtttgacaggagaagtctccagacaatcgaaaacttctacgaatacgatcaccagcaacaattaaaaggaaatcccttacctttcaagaataaatgataagagaacattgcttttgttaagacagtgaatatagatgatttaaatgcaacaaaaagttcggacttaaaggtaaaaatcattgttgtggtcaaatgatctcatataagttgttaggtgatgacaaccgaacaatcaaactatttgattgacacgcgctcgaccaatgggaattttacgttcatctggtgaacgttaaatacgagaaaagtaggggtctcgctgcaggcgctcctttcctctctcaatcctttcccctcccctccccctcctctccccaatcaatccctctcaatccggcctccggccggcccttctttccctccgaaccctagcgccgggctacgcaggctaCTTTGTCATTACTACCTCTTCTTTTTCTCCATTTAGTTCTGTTTATCTCtcaatcaatcaaccaaccaatcaatcaatcaaccaatcaattaatcaatcaaccaaccaatcaatcaatcaatcaaccaatcaatcaaccaaccaaccaaccaacAATACATGCACTACTTACTACGCAAGAATACACTGATTTAAGTTATACGATCGTTTTCCAATTATTAGCTATTTTTGTCTTAGAGCCAAGGTCGTCACCAGACCGCACGTTTTGCAAAACCCGTTCCGATGGCTTGTACCCAGCTCCCTCGTCGTGTAAGCACTTCATGCACTGCCATCATGGACGAACAGCTTATAAAAAGTGTCCTCCTGGAACGCTTTTCAATCCTGCTATAAAAGTCTGTGACTGGCCACGTAATGTGAAATGTGGGGCAGTACAGCCACAAGTTCCAATAGGTAAGATTTgtcggcctgaagtttgtcagccgaaagactgtcacgacttaTAAAAATGGAAATAAACTGCGTCGCTGTGAAGAAATAGAGAAAAATAtcaagaccatggcgggaatcgcacccaacggtttcggtaatctagtcctacgtgtgaaccactacaccacaagaataaccacactagaagcgtagttgtacagtatagtatatgtagtaactaACTGTGGGGATCCGACCGATTCGATAATGAAATAAAGTTGCATCatctggtttgccatggtttatatggtctcccatggttgtatctgatttgccatatggtttatctggtttgccatggtttatATATATGGTCTGCGGTGGTCTGTGATAGGATCGCCGAAAACGACAAAATACAACAACGTTCGACGTTCTGTGTTTTCATATGCATTAAAACGCGCAGATCCTTTCGCACGTCAAACAAGTGATATGTATGAAAACCAAGCTAAACGTTTTGTTTGTTACGTTTAAATATTTGTTGTTGTTGTTTATTTTTTATTTAGTTCTATAATATTCTTGGCTTATTCTCACAAAACTAGCAACCAAACTAATTCAGTTCAAAATTGATTAAACTTTAGTTCCTTCCCAACCAAGAGCTCTTACCCTTACCGCGGTCAACGCCACAACGGTCAAGATGAGCTGGAGAAAACCCCACAAATTCTCCAAGCCACTCCTGCATTATGCCATCAACATCACTAAATCAGGATCTCAAAGCACAGTAAGATTTACAGTTCATGGTATTGCTCGTTCACACACTCAAATTGGGCTGGTACCTGGGAGTAAATATGTTGTACAGATTCATGCAGTGAATAAGGCTGGTGAAGGACAGAGAGCTATAGCCACAGTGACAACGCCTTTTGAAAGTAAGTCATAGAGATCAAGGCGGGTGAATAATAATATAAACGGATATATATGAAGAGGATAAAAAAGAGTTAAACTGAAGGAATATATATTTAAGGTTtacggacaacctcgtgcaactagcgcacattgtgcatgtatcactcttcagaacaaatgttgcgcgaattctcacaagcaacaaatacaaagagagagagataaatgatgtttgcgcgcggagtggtaatacgagcaacatttgctctgcaactagggctcgcaacaatgttgcgcgacaagttagtcttaatgcccgtattaccggaccttTAAATGGATGTTTTTTTTGCATGTATCAAAGTCGCGAATTCTCACTGAAGGTAAAAAGTAAAACCAATTTTTAAGTGAGAAATATAATTTCGAAAGGCGAATAGTCTTTTCCTGGATCTAAATGGATGTTTTTTTTAAAGTAGAACTATTGCGAGTAACCAAAAaatcattgaagtccttttgataacgatttcggaggtttttatctcgtgcaggacattcggggaaaaaaaattattgaagtttttgagatcggaatgttgatgacgtcagacacggggaacatgtcttcttggaattgttgacattagtttgctttggacaaagtattcaggtttaagagcaccttccccgtgtctgacgtcatcaaaatttcgctctcaaaaacttcaataatttttttctcgcaatcagaatcacatcctgagataaaaatctctgaaatcgttatcagaaaggacaaaataataattttaaaattagttactttttgccttcagttcccctgggcccggttgttcgaaaggcgattagtgctaatcctggattagcgtcaatagttttcttaagatttaatcctggattagcgctaatcgcctttcgaacaaccgggccctggtgagcaaaaGTTCACATCAAGTGAGAATGTCTTAACTATTTAAAATATGTTTACGTACGTATACggggtacgttgatggcacaacatgcacctcttggaaagtctttgtcaagtgaagggttgcacgctaaatataatcctttacattgaccgtatTAATTAAAGGTACTATCTATTTTAACCGTAGTTCCACCACCACCCTCCAGCCTGTCAGGAAAGGCTCTGGGTCCTACAGCAATTAGCCTTCGCTGGAAGGACCCTAATCTTGAGAACGACTCCATTCTGACTTACGTCGTCACTTATGGGGTAGCTGGGCTTGAGATTGGACAAAGCAGTTTACATCTCCAAGGTTACGCGAACACCGCTGTCCTAACAAATCTGTTACCAGGAGTAGAATATGGCATCAAGATCCAGGCTATCTCGTTTGGAGGATTTGGAAAACCAAGCACTATCAAAGTCTTTACTTCGTCTGGAGGTGAAAACCGTCGCGTTTTAATAGTCACTAACATATTACCCTAGTCTACTTGTGCTCTCATTGGCAAAATTAATGACAATTTTCTCTCAAATGCGGTTCCTCCCGTTTCACATAAGAACGAtcacatccgtaatatatacactcacatccgtaatatatacactcatttgaaaacaagttgtcgacggggtgaacggcgaacgggaatagcgattgcacgaccgaaaggaactatgggtctaacaaaattatttctaaaaactctttaaattatttgttttcacgacctaaaggaactctggttacgtttattacatatgcaatggaaaggtgcaaatgtttacattcgtttactgaagaattaataaagaatgttgaagacccatagttcctttcggtcgtgcaatggcgatcgccccgccaaccttttttgaaatgagcgCTTATGGTGGTGCTTGTCTTTCTTCACACCTATAAATGCAGCATTGGGTCGGCTTGTCGGTGTACCGTACGCTCATTCTCGTTTTTCATTTTTCACAATATTTCATCTGTGCCAGATTATTTTATCTCCTCGTAACGTGTAGACAtagagtcgtttacgtatgagtgggaaacctacggtatggagttacggtcacggtacggaatcaacgtcatctattcaaccaatcccagcgcacgaaatcactgctcgaccaatcagaatgcttgggtacgtaaccacttcgcagtcatacgaaatctgctctaTCCAAACTTAAATTTCCAAGGATTTACAAACGATATACATATCGTATACCCGCCTCTTCACAGAACGCGCACTGcaggggcgtagcgaggacccaggaattggcgaggcacccagaataaaaaaggggaaaaaacaaggacccaggaattgggaggcaccaagaataaaaaagtaaaaaataccccaaaaaatcaaacaattaattaccaaaatttaggggggacccaccctccctacgctagtGACGCGCAGGAGAACCCCTTTTTATCAAATTCTAATTGCATAGAAATCCTGGCAAAGTAAAGGCGGATGAAGTGTCATAAATGGTACAATCTATGTGCTTCTCCTGTATTCTAATCATTTCACATAAAACAGAATTTTGATGCGAGTCTTTCTTTCCTCAGATTTCTGTCCACCGGGTCATTATTCCAATACTGGAAAGCAACCTTGCCAGAAGTGTAATTATGGTCGATATCAAGCAAAAATAGGAAGGAAAATTTGTACACAATGTCGACATGGTACAATAACACTCATCAAAGGAGCAACTTCAATCACCGACTGTCAGAAAGTGACTTCTGCTCTGATTCTCTCGTTACCAAACACAAACGGAACTGTTTATAAAAGTTTTCATACCAGAACGATTTCCCATTGCGTCACAATATGTCGCGCTAAATCGATTACTGACAATTTCATCTACACATCTAATCAAAAGAACTCACAACCACCAGCAAGAATGTGGCTAACAGCTATTTTGATTGTTCTACTCGTTAACGAGATATCAATAAGCCAAGCTAAGAAGCCAAGGTCGTCACCAGACCGCACGTTTTGCAAAACCCGTTCCGATGGCTTGTACCCAGCTCCCTCGTCGTGTAAGCACTTCATGCACTGCCATCATGGACGAACAGCTTATAAAAAGTGTCCTCCTGGAACGCTTTTCAATCCTGCTATAAAAGTCTGTGACTGGCCACGTAATGTGAAATGTGGGGCAGTACAGCCACAAGTTCCAATAGTTCCTTCCCAACCAAGAGCTCTTACCCTTACCGCGGTCAACGCCACAACGGTCAAGATGAGCTGGAGAAAACCCCACAAATTCTCCAAGCCACTCCTGCATTATGCCATCAACATCACTAAATCAGGATCTCAAAGCACAGTAAGATTTACAGTTCATGGTATTGCTCGTTCACACACTCAAATTGGGCTGGTACCTGGGAGTAAATATGTTGTACAGATTCATGCAGTGAATAAGGCTGGTGAAGGACAGAGAGCTATAGCCACAGTGACAACGCCTTTTGAAATTCCACCACCACCCTCCAGCCTGTCAGGAAAGGCTCTGGGTCCTACAGCAATTAGCCTTCGCTGGAAGGACCCTAATCTTGAGAACGACTCCATTCTGACTTACGTCGTCACTTATGGGGTAGCTGGGCTTGAGATTGGACAAAGCAGTTTACATCTCCAAGGTTACGCGAACACCGCTGTCCTAACAAATCTGTTACCAGGAGTAGAATATGGCATCAAGATCCAGGCTATCTCGTTTGGAGGATTTGGAAAACCAAGCACTATCAAAGTCTTTACTTCGTCTGGAGATTTCTGTCCACCGGGTCATTATTCCAATACTGGAAAGCAACCTTGCCAGAAGTGTAATTATGGTCGATATCAAGCAAAAATAGGAAGGAAAATTTGTACACAATGTCGACATGGTACAATAACACTCATCAAAGGAGCAACTTCAATCACCGACTGTCAGAAAGTGACTTCTGCT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF01607	CBM_14	Chitin binding Peritrophin-A domain	Domain	Interproscan
PF07699	Ephrin_rec_like	Tyrosine-protein kinase ephrin type A/B receptor-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002557	Domain	Chitin binding domain	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR011641	Domain	Tyrosine-protein kinase ephrin type A/B receptor-like	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR036508	Homologous_superfamily	Chitin binding domain superfamily	Interproscan
IPR050991	Family	Extracellular Matrix Regulatory Proteins	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46708	TENASCIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0008061	Molecular Function	chitin binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-