Gene detail

Detailed information of HK74SY85_g28384 in Paraphelliactis xishaensis sp. nov. Gene info

Gene ID	Annotation	Contig	Start	End	Strand
HK74SY85_g28384	TRANSLATION ELONGATION FACTOR-RELATED	ctg633	45888	47746	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

HK74SY85_g28384

CATGGCAAATCTACCCTAACTGACTCTTTGGTCAGTAAAGCAGGCATTATTGCTAATGCCAAAGCTGGAGAAACGAGGTTCACAGACACCCGCAAAGATGAACAAGAAAGATGTATTACCATCAAGTCAACGTAAGTACTAAGAATTACTGTAGCCAGTGATGTTTGTTATTTAATATGTGGTTCTTGGGAGGGCAATACAATTAAATTAAATTTACATGGCGGACTTAGCAAAGCAAATAAATAGAAATTTAAAACATTCAGTGATGAGTGGTTGGTAGCTTGTTTTATTACAATGCAGTTGATAAAATATTCTTTTTTCTACCAGTGCCATTTCTTTGTACTATGAATTGTCTGAAGCTGATCTTGTGTATGTACCTGGAGACATCAAAGGCGAGAGAGGTTTCTTGATAAACCTGATTGATTCACCTGGACACGTCGATTTTTCATCTGAAGTTACTGCAGCTCTACGTGTCACTGATGGTGCCCTTGTTGTAGTTGACAGTGTCAGTGGTAGGTGTCTAcagtgaactctctctagacgtacaccctcgggaccaccaccaactgtctgtcttaggagaggtgttcatcttaggtagagttaagatacagtgaaataacgggttcagttttagcagggaacaccaccaactgtctgtcttagagaggtgtgcgtcttagagaggtgttcatcttagagaggtgtctgtcttggatcagagaggtgtccatcttagagaggtgtccatcttagagaggtgtccatcttagagaagtgtccatcttagagaggtgtccatcttagagaggtgtccatcttagaggtgtccatcttagagaggtgtccatcttagagaggtgtctgtcttaaaggggggtctgtcttagaggggtgtctgtcttagagaggtatccattaggagagattcactttatTGTCTAAACCAAATCATTTTCTGAAATCATACTTATTTTAGAAACAACTCCTGACCCATTTTTCATTGTTCTCATTAATAATTGCCTTTTTATTTTGGAAACAACAGGAGTCTGTGTGCAAACTGAGACTGTCCTGCGTCAGGCCATTGCTGAACGTATCAAGCCCATTTTGTTCTTGAACAAAATGGACAGGGCTCTCCTTGAGTTACAATTGGAAATGGAAGATTTGTACCAAACCTTCCAGAGGATTGTTGAAAGTACTAATGTCATCATTGCAACATACAGCGATGAAGAAGGACCAATGGGAAACATCCAGGTAAGGTCAATACTCTGAAGGTATTTCTTTAACATATTACCCACATTTGGAACTGGAATTTCTTGTAGTGTAGTGGTTTCAGCTCTAAAGTGGGAGAGAGGTGGAACTATAAGGGTTTGACGCTTATGACTAAAATCCTCAAATTCCATTCATTTATTTTTTAAACCTTCAGTGAAGGATCCAAGTAGTAGGTTCCCATTGAATTTCTGATGATCACTACTTTTACCAGAATTTACAGTAAATTATCTGATATAGTGCAACTAAAAACTTGTCACGTAAATATATGTGAAtatggtagaaccccactaactatctaactccctactaacttgaacacaacccacatcccttggaacttgtttttcagttaattGATGGTAGAAGAGTAAGGAAAGCACCTCTGCTTGCAGGGTAGAGTTAGCGGGGTTCTACTACAGGCACTGTCCGTGCCATGGGTCTTTCATAGTCGAGTCATACTGAAGTGGTTTTTTTTGCTTTTGCAGGTTTCTCCTCAAGCTGGTACAGTAGGATTTGGTTCAGGGCTTCATGGCTGGGCTTTCTCCCTAAAGCAATTTGCTGAAATTTACCAGAAAAAATTCAAAATTCATGGCAAATCTACCCTAACTGACTCTTTGGTCAGTAAAGCAGGCATTATTGCTAATGCCAAAGCTGGAGAAACGAGGTTCACAGACACCCGCAAAGATGAACAAGAAAGATGTATTACCATCAAGTCAACTGCCATTTCTTTGTACTATGAATTGTCTGAAGCTGATCTTGTGTATGTACCTGGAGACATCAAAGGCGAGAGAGGTTTCTTGATAAACCTGATTGATTCACCTGGACACGTCGATTTTTCATCTGAAGTTACTGCAGCTCTACGTGTCACTGATGGTGCCCTTGTTGTAGTTGACAGTGTCAGTGAAACAACAGGAGTCTGTGTGCAAACTGAGACTGTCCTGCGTCAGGCCATTGCTGAACGTATCAAGCCCATTTTGTTCTTGAACAAAATGGACAGGGCTCTCCTTGAGTTACAATTGGAAATGGAAGATTTGTACCAAACCTTCCAGAGGATTGTTGAAAGTACTAATGTCATCATTGCAACATACAGCGATGAAGAAGGACCAATGGGAAACATCCAGGTTTCTCCTCAAGCTGGTACAGTAGGATTTGGTTCAGGGCTTCATGGCTGGGCTTTCTCCCTAAAGCAATTTGCTGAAATTTACCAGAAAAAATTCAAAATT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00009	GTP_EFTU	Elongation factor Tu GTP binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000795	Domain	Translational (tr)-type GTP-binding domain	Interproscan
IPR005225	Domain	Small GTP-binding protein domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR031157	Conserved_site	Tr-type G domain, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42908	TRANSLATION ELONGATION FACTOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003746	Molecular Function	translation elongation factor activity	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006414	Biological Process	translational elongation	Interproscan
GO:0043022	Molecular Function	ribosome binding	Interproscan
GO:1990904	Cellular Component	ribonucleoprotein complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-