Detailed information of HK74SY85_g224 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg2:673366...700096
NR annotation: XP_031566214.1, protocadherin Fat 4-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P35447Spondin-1 OS=Xenopus laevis OX=8355 GN=spon1 PE=2 SV=1
Q5DRB8Protocadherin gamma-A2 OS=Pan troglodytes OX=9598 GN=PCDHGA2 PE=3 SV=1
Q9GLX9Spondin-1 OS=Bos taurus OX=9913 GN=SPON1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028CadherinCadherin domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF19028TSP1_spondinSpondin-like TSP1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR044004DomainSpondin-like TSP1 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24026FAT ATYPICAL CADHERIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan

TOP