Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
Genomic Location: ctg285:200385...206049
NR annotation: KXJ29789.1, U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1 [Exaiptasia diaphana]
| CDS | |
| HK74SY85_g22214 | |
| Transcript |
| HK74SY85_g22214 |
| Protein |
| HK74SY85_g22214 |
| Uniprot term | Description |
|---|---|
| Q62377 | U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 OS=Mus musculus OX=10090 GN=Zrsr2 PE=1 SV=1 |
| Q64707 | U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2-like OS=Mus musculus OX=10090 GN=Zrsr2-ps1 PE=1 SV=1 |
| Q15696 | U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 OS=Homo sapiens OX=9606 GN=ZRSR2 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | Family | Interproscan |
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003954 | Domain | RNA recognition motif domain, eukaryote | Interproscan |
| IPR036855 | Homologous_superfamily | Zinc finger, CCCH-type superfamily | Interproscan |
| IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR009145 | Family | U2 auxiliary factor small subunit | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12620 | U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0089701 | Cellular Component | U2AF complex | Interproscan |
| GO:0005681 | Cellular Component | spliceosomal complex | Interproscan |
| GO:0030628 | Molecular Function | pre-mRNA 3'-splice site binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K24273 | ZRSR; U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein | - | Spliceosome | ko03041 | deepkoala |