| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| HK74SY85_g21242 | ATP-DEPENDENT RNA HELICASE | ctg258 | 471994 | 494243 | + |
| CDS | |||||
| HK74SY85_g21242 | |||||
| Transcript |
| HK74SY85_g21242 |
| Protein |
| HK74SY85_g21242 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00270 | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
| PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| PF00575 | S1 | S1 RNA binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR002464 | Conserved_site | DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site | Interproscan |
| IPR003029 | Domain | S1 domain | Interproscan |
| IPR011545 | Domain | DEAD/DEAH box helicase domain | Interproscan |
| IPR012340 | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR042035 | Homologous_superfamily | DEAH helicase, winged-helix domain | Interproscan |
| IPR044762 | Domain | DHX8/ Prp22, DEXH-box helicase domain | Interproscan |
| IPR049588 | Domain | DHX8, GH2-like domain | Interproscan |
| IPR049621 | Domain | DHX8 helicase, S1 domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR18934 | ATP-DEPENDENT RNA HELICASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000390 | Biological Process | spliceosomal complex disassembly | Interproscan |
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003724 | Molecular Function | RNA helicase activity | Interproscan |
| GO:0004386 | Molecular Function | helicase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005622 | Cellular Component | intracellular anatomical structure | Interproscan |
| GO:0071013 | Cellular Component | catalytic step 2 spliceosome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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