Detailed information of HK74SY85_g13511 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg110:126752...144360
NR annotation: XP_031571149.1, ribosome biogenesis protein bop1-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0JMQ0Ribosome biogenesis protein bop1 OS=Danio rerio OX=7955 GN=bop1 PE=2 SV=1
A4IHS2Ribosome biogenesis protein bop1 OS=Xenopus tropicalis OX=8364 GN=bop1 PE=2 SV=1
Q7ZXX9Ribosome biogenesis protein bop1-B OS=Xenopus laevis OX=8355 GN=bop1-b PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF08145BOP1NTBOP1NT (NUC169) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR012953DomainBOP1, N-terminal domainInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR028598FamilyWD repeat BOP1/Erb1Interproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR17605RIBOSOME BIOGENESIS PROTEIN BOP1 BLOCK OF PROLIFERATION 1 PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0000463Biological Processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0030687Cellular Componentpreribosome, large subunit precursorInterproscan
GO:0042254Biological Processribosome biogenesisInterproscan
GO:0043021Molecular Functionribonucleoprotein complex bindingInterproscan
GO:0070545Cellular ComponentPeBoW complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14824ERB1, BOP1; ribosome biogenesis protein ERB1-Ribosome biogenesisko03009deepkoala

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