Gene detail

Detailed information of HK74SY85_g10232 in Paraphelliactis xishaensis sp. nov.

Genomic Location: ctg66:3577814...3579328
NR annotation: KXJ25544.1, putative ATP-dependent RNA helicase DHX35 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

HK74SY85_g10232

ttttctttttcatgtcatttctcctgtgtcaaagattatgagctgaaacttcgctttctaactaatatcgagctgctcttttcgtttctgggcttcattttgacactgctgcttgatttaagaggattggggtcacgtgaccagtcagtgcataaggcgtattTGGCCATTGTCGGGAAAAACACTTCTCCGATAACGTTCTGTGTTAGAATGTGTTCGATATTCCTATTTGAATCCAAATTATGCAGTGATAAGAGTAGGACTCTTTGGGAAAGAAATGGACTTTATTTATTTATTTTTGGTAGCCAAAAGGTGAAATCTTCCTTTCCATGTTCTCCATATAAAGGCTTGTGTTCTTACAGTAGATGTTATCTGTGTTCAGGTGATGTAGATCAAGTGAGTCGTTGTATTGTGGCTGGTTTCTTTGCTAACGCAGCACGTTTAGATGCATTTGGATCATACAGGTAACCCATCACCTTATTATCACCATCCATTGATGGCACTGAAGTAAAAAAGTAGTGAATGAATTGCAGACCCTATATCAGAGGTCGAGTCTTCGTGAAAATCCTTTTCCGGCTTCGCTCAGTTATCACTACTGAAATACAGCATCGTCGCGGAGGAGGGAGGGaaaaaacaaacaacaaaaaaagcaaagcaaaAATTTCACCCAGCGCGAACTCGACTAGCCTCCTTTGCAGCCGCTCGTATGCACTCGACCGGCGTCGACCAGAGCAAACATTGTTATAAAACTGACTTTCTTGGAGAAACTCGTAAACACAGTGGCCGGTATTCAAACGTTGATTTGATAAAATCTTTTTTTTCCGTCTTCTTCCAGGACAATACGAGACAATCATGCTTTGTCGATTCATCCTAATTCTGTTCTTTATACCGAAGAACAGCCTGAATGGTGAGTTAATGCTGTGTTTTCAGAATTTTATGTACTGTTTAAAACAAGAGACGTAGCCGATATAACACGGCATAAGAAATATACCTTTAAGTGGTCTGTTACCAAGGTAACGGCTACGGTCCATTTTTACTCACAGATAATAGTAGGATGTATTTGTTTTCTACAGGGTGATCTATCACGAGATTCTGCAGACATCAAAGTATTACATGAGAGATATTACCAAGGTAACCAGTGCAAGGGTGGGGTATCATTTACCTTTGGGtagttggtcagtgtacggccttgtaatcgaaaggttcctgatttgttccagagttccctctaatctgtgtagctcagtGTGACAGGGAGGGGGTACAGAGCGCACCGTAGCAGTAGGAACACGTGCATTAAATGTCAACCTTTTATCTATTTATGATCTATCAGATTGAACCGTCGTGGTTGTACGAGTTATCACCACATTACTACGAATACGGCACGGTAAGGGCTTCGTTTCTTATTTCTATTTCTCAAAAACAAGTGAGATTCACCAAATGCCGGAATTGCTGATTGCTTAACTGGTTTCTCTTCAGGAAAGAGAAGTCGCTGCAAAACGAGCAAAGTTTGAGttttctttttcatgtcatttctcctgtgtcaaagattatgagctgaaacttcgctttctaactaatatcgagctgctcttttcgtttctgggcttcattttgacactgctgcttgatttaagaggattggggtcacgtgaccagtcagtgcataaggcgtattTGGCCATTGTCGGGAAAAACACTTCTCCGATAACGTTCTGTGTTAGAATGTGTTCGATATTCCTATTTGAATCCAAATTATGCAGTGATAAGAGTAGGACTCTTTGGGAAAGAAATGGACTTTATTTATTTATTTTTGGTAGCCAAAAGGTGAAATCTTCCTTTCCATGTTCTCCATATAAAGGCTTGTGTTCTTACAGTAGATGTTATCTGTGTTCAGGTGATGTAGATCAAGTGAGTCGTTGTATTGTGGCTGGTTTCTTTGCTAACGCAGCACGTTTAGATGCATTTGGATCATACAGGACAATACGAGACAATCATGCTTTGTCGATTCATCCTAATTCTGTTCTTTATACCGAAGAACAGCCTGAATGGGTGATCTATCACGAGATTCTGCAGACATCAAAGTATTACATGAGAGATATTACCAAGATTGAACCGTCGTGGTTGTACGAGTTATCACCACATTACTACGAATACGGCACGGAAAGAGAAGTCGCTGCAAAACGAGCAAAGTTTGAG

Protein

Uniprot

Uniprot term	Description
Q9H5Z1	Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens OX=9606 GN=DHX35 PE=1 SV=2
Q5RBD4	Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii OX=9601 GN=DHX35 PE=2 SV=1
Q8VY00	Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thaliana OX=3702 GN=ESP3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07717	OB_NTP_bind	Oligonucleotide/oligosaccharide-binding (OB)-fold	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011709	Domain	DEAD-box helicase, OB fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18934	ATP-DEPENDENT RNA HELICASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004386	Molecular Function	helicase activity	Interproscan
GO:0005622	Cellular Component	intracellular anatomical structure	Interproscan
GO:0071013	Cellular Component	catalytic step 2 spliceosome	Interproscan