Gene detail

Detailed information of ENSZWYP00000024826.1 in Lamellibrachia columna Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSZWYP00000024826.1	REGULATORY-ASSOCIATED PROTEIN OF MTOR	chr6	55708475	55735590	+

Gene Structure

More details in Jbrowse Sequence

CDS

ENSZWYT00000024826.1

ATGGCTGTAGAACAATTAGAAGATAGGTGTGACAAAGCGAACGGGAATCATATCGTTGAACAACCACCTCTTGATGGACCAACATTGTGGGCGTTCACTCTGAAACGACATATAGAAAAAATCGAAGGTTCTAAAGCTGTGACGCAGACATGGCGCATGAAAGAGCGGATGAAGACAGTGAGCGTTGCACTGGTTTTGTGCCTGAACGTTGGAGTCGACCCTCCTGATGTTGTCAAGATATCTCCATGTGCCCGTCTAGAATGCTGGATAGATCCATTATCAATGAGCCCGCAGAAGGCCCTTGAGGCAATTGGCTCGAGTCTACAGCGTCAGTATGAGCGATGGCAGCCTCGTGCACGCTACAAGCAAAGTCTCGACCCGACTATGGAAGAAGTGAAGAAACTGTGCATCTCACTCCGACGCAACGCCAAGGAAGAGAGAGTTCTTTTCCACTACAATGGCCATGGAGTGCCTCGGCCAACAGTAAATGGGGAGATCTGGGTATTCAACAAGAGCTACACCCAGTACATCCCCCTGTCTGTATACGACCTGCAGACATGGATGGGAAGTCCGTCCATTTATGTCTATGACTGCTCAAATGCTGGAATCATTATCCAGTCATTTAAACAGTTCTCAGCTCAACGAGAGCAAGAGGTAGTGGCATTGAACTTTTATGTGAAATATTTATCCACTAAGAACTGTATCCAGCTTGCCGCGTGCAGCACCAACGAACTGCTGCCCATGAATCCAGAACTGCCAGCTGACCTCTTCACCGCTTGTCTCACTACGCCAATCAAAACGGCTCTACGTTGGTTTGTTCTGCAGAATACTGGCAAACTTGTGCCTAACATCACATTAGACTTGATTGACAAGATTCCTGGCCAGTTGAATGACCGACGCACAATGCTGGGTGAACTCAACTGGATCTTCACAGCGATCACTGATACAATCGCATGGAACACACTACCCAGAGAACTCTTTCAGAAGTTATTCCGCCAGGATCTACTTGTGGCTAGTCTCTTCCGTAACTTCCTGCTGGCCGAGCGCATCATGCGGTCCTACAACTGCACTCCTGTCTCAAGTCCCAAGTTTCCCCACACCTACCAGCACCCCATGTGGCAAGCGTGGGACCTGGCCTTGGACCTCTGCCTCTCGCAGCTCTCTCAGATCCTGGCCGATGGTCGTAGCTTCCAACACAGTCCGTTCTTTGCTGAGCAACTCACAGCCTTCCAGGTGTGGCTGAACTATGGCTCAGAGAAACGCAGTCCACCCGAACAGCTACCCATAGTGCTTCAGGTGCTACTTAGTCAGGTCCACAGGCTGCGAGCTCTTGATCTCCTTGGACACTTCCTCGACCTAGGAGCCTGGGCAGTCAGTCTTGCTCTCTCTGTCGGCATCTTCCCCTATGTGCTCAAGTTGCTCCAGAGTTCTGCGAGAGAACTACGGCCTCTCCTGGTGTTCATCTGGGCCAAGATCCTCGCTGTCGACAATAGTTGTCAGGCAGACCTCGTGAAGGATAGCTGTCATCGATACTTCATCTCCGTCTTGACAGACAGCTACATGCCAGTAAGTTGTTGGCTTGTTCCATTGCTATGTATCTTGACAGACAGCTACATGCCAGAAGCAGCACTGCAGGCTAACCTGATTGCCATCTGTCTCGACCAGTTGAAAGATGAACATCCTTTGCTGCGACAGTGGCTGGCCCTCTGTCTTGGGAAGGTGTGGACGTCGTTTGATGCAGCCCGTTGGTGTGGGGTCCGTGACAGTGCTCATGAGAAACTGTACAAGTTATTAAGGGACCCCGTTCCTGACGTTCGAGCAGCTGCTGTATTTGCCCTTGGTACATTCATTAGCAACACAACTGAACGTAGTGACCATGCCAACAACATAGACCACAGCGTTGCCATGACACTAATCAGCGTCACCCAGGATGGTAGTTCATTGGTCCGAAAGGAGCTGGTGGTGGCTCTTGGAGGCCTTGTCATGCACTCCGCGGTTCAATTTGCTGCTGTCGCATTCAAGTTCCTGGAGGACGAGAAACAGCAGAAGACACTCGCAGTGCCACCTGTTGGGCTGAATATTGCCATCGGAGCAGGGATGTCGACAGTCGGAGCAGTGACGTCTGGAATGCGGAGGAGTGCCTCTGCCCGGAGTCTCAAGGCAAACCTCTCTCCCATAAACCAAACAGGTAGGGCCTGGCATGACCACATGTTACATGGTTCCTGTTACTTGTATCGTGTGCCTTCCAACACATCAATGTCAGGGCTGCTGGGGACGAGTTATGGAGGCATCTACACCCATGTGTGGAAAGCTCTTGTGCAACTCTCTATAGACCCCTGCCCAGAGGTTGCTGACACAACGAAGACACTGATTGATTTTGTCAATACAACGCCACCAAAGGGGAACCTGGTCGACTCCCACGGGCATCCGTCTGTGCGAACCTCCGACCAGCTGACATCCCCACGGAACCTTCTGGTGGGTGGCGCCACTGGCAACTACCCACACTCATCACAATTCAGTCGCACGCGCAAGCTGTTTGACAGAGGACCTGATCTCTTGGAGGAGAACAGTGACGAGGCTCAGTTCAAGAGACAACTCGTGTCAACAGAGTTCTTTCAGTGGAGTTGTCGTCACTTCTCTCAGTCACTCATGGGCGCATCGGACGCAACCGACCCAGAGAGCATGACACGTCATGAACACAACTATCGTGTGTCCCGAGCAGAACGTGTCCGCAAGGAGGCGGTGGTGGAACAGTCACGAGCGGGTATGTCATGGTCATGGGTGACGGTATGGTCCTTGTTGGTCATTGATGACAGTCTCCAAATCTGCACAAAGACACCCATTCAGAATTGGTGGCACTGTTTATCACATGGAATGTTTCTCCTGTCTATTTCAGGTTTCTCTCGACTGGACGAGCAGATCTTCATCAACCGTAATGAAAGCTTGCCTGGGGTGGTTCGCTTCCACCCCTATGAGCCCCATCTGGCTGTGGCAGACAAGGAGGGGGTCAGCCTGTGGGATTGGGAACAGGGTGTGAAGTTGACACACTTCCACAACTACAACCCTTCCCCCAGCCGAATCACCTGCATGGACTTCATCAACTGTGACAACGATGCCCTCCTACTCACCGGCTCAGACGACGGAGCTGTGAGGGTCTGGGGTAGATTCTCCCGGGACACGTCACCTCTGTTGATGACGTCCTGGCAGGCTCTTTCTGACATGCTGCCATCTAACAGAGCATCAGGCCTTGTCATAGACTGGGAGCAGGCCACGGGAAGACTGTTTGCATCGGGAGACGTCCGAACCATCCAGGTGTGGGACGCCAACAGTGAACTGAAGATACAGGACATCGCAACAGGTGCAGACAGCTGTGTCACAAGTCTGACCGCTGGTCACCTCGGCGAAAGTGTCGTCACTGCAGGGTTTGGTGACGGCTGTGTGCGGCTATATGATCATCGCATGGCCAACAGCGAATGCCGGAGCACTTCATTACGCAAACATCTCAGTTGGGTTGTAAAGGTGCACATGCTGAATGAATCCACACTGTTGAGTTCAACTGTTTGCAGTGTTGACGGAGAGATTCGTCGTTGGGACGTGAGAGCGGACAAGATGATGAACACTATCAACGTGAAGCAGGGTGTGACATCAGTCGAAGTCCACAGCTATGGTGACATCATTGCCTGTGCATCAGCTCAGCAGTTCATTGGTGTTTTCAATCAGTCGGGAGACACCCTCAGTCAGATCAAGTATCATGTTGGCTTCATGGGCCAACGCATCGCCCCTGTCACATGTCTAGCCTTCCATCCCTACAAGGTAGGTGTCACACGCAATGTGTTCCCTCACCTCTCCAGCCTTCCATCCCTACAAGATAGATGTAACACCCAGTGTGTTACCTCACCTATCCAGCCTTCCATCCCAACAAGGTAG

Transcript

ENSZWYT00000024826

ATGGCTGTAGAACAATTAGAAGATAGGTGTGACAAAGCGAACGGGAATCATATCGTTGAACAACCACCTCTTGATGGACCAACATTGTGGGCGTTCACTCTGAAACGACATATAGAAAAAATCGAAGGTTCTAAAGCTGTGACGCAGACATGGCGCATGAAAGAGCGGATGAAGACAGTGAGCGTTGCACTGGTTTTGTGCCTGAACGTTGGAGTCGACCCTCCTGATGTTGTCAAGATATCTCCATGTGCCCGTCTAGAATGCTGGATAGATCCATTATCAATGAGCCCGCAGAAGGCCCTTGAGGCAATTGGCTCGAGTCTACAGCGTCAGTATGAGCGATGGCAGCCTCGTGCACGCTACAAGCAAAGTCTCGACCCGACTATGGAAGAAGTGAAGAAACTGTGCATCTCACTCCGACGCAACGCCAAGGAAGAGAGAGTTCTTTTCCACTACAATGGCCATGGAGTGCCTCGGCCAACAGTAAATGGGGAGATCTGGGTATTCAACAAGagCTACACCCAGTACATCCCCCTGTCTGTATACGACCTGCAGACATGGATGGGAAGTCCGTCCATTTATGTCTATGACTGCTCAAATGCTGGAATCATTATCCAGTCATTTAAACAGTTCTCAGCTCAACGAGAGCAAGAGGTAGTGGCATTGAACTTTTATGTGAAATATTTATCCACTAAGAACTGTATCCAGCTTGCCGCGTGCAGCACCAACGAACTGCTGCCCATGAATCCAGAACTGCCAGCTGACCTCTTCACCGCTTGTCTCACTACGCCAATCAAAACGGCTCTACGTTGGTTTGTTCTGCAGAATACTGGCAAACTTGTGCCTAACATCACATTAGACTTGATTGACAAGATTCCTGGCCAGTTGAATGACCGACGCACAATGCTGGGTGAACTCAACTGGATCTTCACAGCGATCACTGATACAATCGCATGGAACACACTACCCAGAGAACTCTTTCAGAAGTTATTCCGCCAGGATCTACTTGTGGCTAGTCTCTTCCGTAACTTCCTGCTGGCCGAGCGCATCATGCGGTCCTACAACTGCACTCCTGTCTCAAGTCCCAAGTTTCCCCACACCTACCAGCACCCCATGTGGCAAGCGTGGGACCTGGCCTTGGACCTCTGCCTCTCGCAGCTCTCTCAGATCCTGGCCGATGGTCGTAGCTTCCAACACAGTCCGTTCTTTGCTGAGCAACTCACAGCCTTCCAGGTGTGGCTGAACTATGGCTCAGAGAAACGCAGTCCACCCGAACAGCTACCCATAGTGCTTCAGGTGCTACTTAGTCAGGTCCACAGGCTGCGAGCTCTTGATCTCCTTGGACACTTCCTCGACCTAGGAGCCTGGGCAGTCAGTCTTGCTCTCTCTGTCGGCATCTTCCCCTATGTGCTCAAGTTGCTCCAGAGTTCTGCGAGAGAACTACGGCCTCTCCTGGTGTTCATCTGGGCCAAGATCCTCGCTGTCGACAATAGTTGTCAGGCAGACCTCGTGAAGGATAGCTGTCATCGATACTTCATCTCCGTCTTGACAGACAGCTACATGCCAGTAAGTTGTTGGCTTGTTCCATTGCTATGTATCTTGACAGACAGCTACATGCCAGAAGCAGCACTGCAGGCTAACCTGATTGCCATCTGTCTCGACCAGTTGAAAGATGAACATCCTTTGCTGCGACAGTGGCTGGCCCTCTGTCTTGGGAAGGTGTGGACGTCGTTTGATGCAGCCCGTTGGTGTGGGGTCCGTGACAGTGCTCATGAGAAACTGTACAAGTTATTAAGGGACCCCGTTCCTGACGTTCGAGCAGCTGCTGTATTTGCCCTTGGTACATTCATTAGCAACACAACTGAACGTAGTGACCATGCCAACAACATAGACCACAGCGTTGCCATGACACTAATCAGCGTCACCCAGGATGGTAGTTCATTGGTCCGAAAGGAGCTGGTGGTGGCTCTTGGAGGCCTTGTCATGCACTCCGCGGTTCAATTTGCTGCTGTCGCATTCAAGTTCCTGGAGGACGAGAAACAGCAGAAGACACTCGCAGTGCCACCTGTTGGGCTGAATATTGCCATCGGAGCAGGGATGTCGACAGTCGGAGCAGTGACGTCTGGAATGCGGAGGAGTGCCTCTGCCCGGAGTCTCAAGGCAAACCTCTCTCCCATAAACCAAACAGGTAGGGCCTGGCATGACCACATGTTACATGGTTCCTgttacttgtatCGTGTGCCTTCCAACACATCAATGTCAGGGCTGCTGGGGACGAGTTATGGAGGCATCTACACCCATGTGTGGAAAGCTCTTGTGCAACTCTCTATAGACCCCTGCCCAGAGGTTGCTGACACAACGAAGACACTGATTGATTTTGTCAATACAACGCCACCAAAGGGGAACCTGGTCGACTCCCACGGGCATCCGTCTGTGCGAACCTCCGACCAGCTGACATCCCCACGGAACCTTCTggtgggtggcgccactggcaACTACCCACACTCATCACAATTCAGTCGCACGCGCAAGCTGTTTGACAGAGGACCTGATCTCTTGGAGGAGAACAGTGACGAGGCTCAGTTCAAGAGACAACTCGTGTCAACAGAGTTCTTTCAGTGGAGTTGTCGTCACTTCTCTCAGTCACTCATGGGCGCATCGGACGCAACCGACCCAGAGAGCATGACACGTCATGAACACAACTATCGTGTGTCCCGAGCAGAACGTGTCCGCAAGGAGGCGGTGGTGGAACAGTCACGAGCGGGTATGTCATGGTCATGGGTGACGGTATGGTCCTTGTTGGTCATTGATGACAGTCTCCAAATCTGCACAAAGACACCCATTCAGAATTGGTGGCACTGTTTATCACATGGAATGTTTCTCCTGTCTATTTCAGGTTTCTCTCGACTGGACGAGCAGATCTTCATCAACCGTAATGAAAGCTTGCCTGGGGTGGTTCGCTTCCACCCCTATGAGCCCCATCTGGCTGTGGCAGACAAGGAGGGGGTCAGCCTGTGGGATTGGGAACAGGGTGTGAAGTTGACACACTTCCACAACTACAACCCTTCCCCCAGCCGAATCACCTGCATGGACTTCATCAACTGTGACAACGATGCCCTCCTACTCACCGGCTCAGACGACGGAGCTGTGAGGGTCTGGGGTAGATTCTCCCGGGACACGTCACCTCTGTTGATGACGTCCTGGCAGGCTCTTTCTGACATGCTGCCATCTAACAGAGCATCAGGCCTTGTCATAGACTGGGAGCAGGCCACGGGAAGACTGTTTGCATCGGGAGACGTCCGAACCATCCAGGTGTGGGACGCCAACAGTGAACTGAAGATACAGGACATCGCAACAGGTGCAGACAGCTGTGTCACAAGTCTGACCGCTGGTCACCTCGGCGAAAGTGTCGTCACTGCAGGGTTTGGTGACGGCTGTGTGCGGCTATATGATCATCGCATGGCCAACAGCGAATGCCGGAGCACTTCATTACGCAAACATCTCAGTTGGGTTGTAAAGGTGCACATGCTGAATGAATCCACACTGTTGAGTTCAACTGTTTGCAGTGTTGACGGAGAGATTCGTCGTTGGGACGTGAGAGCGGACAAGATGATGAACACTATCAACGTGAAGCAGGGTGTGACATCAGTCGAAGTCCACAGCTATGGTGACATCATTGCCTGTGCATCAGCTCAGCAGTTCATTGGTGTTTTCAATCAGTCGGGAGACACCCTCAGTCAGATCAAGTATCATGTTGGCTTCATGGGCCAACGCATCGCCCCTGTCACATGTCTAGCCTTCCATCCCTACAAGGTAGGTGTCACACGCAATGTGTTCCCTCACCTCTCCAGCCTTCCATCCCTACAAGATAGATGTAACACCCAGTGTGTTACCTCACCTATCCAGCCTTCCATCCCAACAAGGTAG

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF02985	HEAT	HEAT repeat	Repeat	Interproscan
PF14538	Raptor_N	Raptor N-terminal CASPase like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000357	Repeat	HEAT repeat	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR004083	Family	Regulatory associated protein of TOR	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR029347	Domain	Raptor, N-terminal CASPase-like domain	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12848	REGULATORY-ASSOCIATED PROTEIN OF MTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0009267	Biological Process	cellular response to starvation	Interproscan
GO:0010506	Biological Process	regulation of autophagy	Interproscan
GO:0030307	Biological Process	positive regulation of cell growth	Interproscan
GO:0030674	Molecular Function	protein-macromolecule adaptor activity	Interproscan
GO:0031929	Biological Process	TOR signaling	Interproscan
GO:0031931	Cellular Component	TORC1 complex	Interproscan
GO:0038202	Biological Process	TORC1 signaling	Interproscan
GO:0071230	Biological Process	cellular response to amino acid stimulus	Interproscan
GO:0071902	Biological Process	positive regulation of protein serine/threonine kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-