| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| ENSQHTP00000033040.1 | DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL | CAVMGF010000075.1 | 1153193 | 1155280 | - |
| CDS | |||||
| ENSQHTT00000033040.1 | |||||
| Transcript |
| - |
| Protein |
| ENSQHTP00000033040.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00270 | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
| PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| PF03880 | DbpA | DbpA RNA binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000629 | Conserved_site | ATP-dependent RNA helicase DEAD-box, conserved site | Interproscan |
| IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR005580 | Domain | DEAD box helicase DbpA/CsdA, RNA-binding domain | Interproscan |
| IPR011545 | Domain | DEAD/DEAH box helicase domain | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR014014 | Domain | RNA helicase, DEAD-box type, Q motif | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR028618 | Family | ATP-dependent RNA helicase DeaD | Interproscan |
| IPR034415 | Domain | CsdA, RNA recognition motif | Interproscan |
| IPR050547 | Family | DEAD box ATP-dependent RNA helicases | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47963 | DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000027 | Biological Process | ribosomal large subunit assembly | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003724 | Molecular Function | RNA helicase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0005840 | Cellular Component | ribosome | Interproscan |
| GO:0009409 | Biological Process | response to cold | Interproscan |
| GO:0033592 | Molecular Function | RNA strand annealing activity | Interproscan |
| GO:0070417 | Biological Process | cellular response to cold | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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