Gene detail

Detailed information of ENSQHTP00000029479.1 in Bathymodiolus brooksi Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSQHTP00000029479.1	RAD54-LIKE	8	77012669	77073044	-

Gene Structure

More details in Jbrowse Sequence

CDS

ENSQHTT00000029479.1

ATGTCTTCTTCCAGGAGGAGAAAACCTTTAGTAACGAGAAAGGTCTTATCTGATGATGAAAAAACAAATGATGAAGATAGTGTACTAACAAATGGTGATGTTAAAGACACAGAAGATAAAGATGACATCCCAGAGGATCTTCCTGAAGGAACAGTTATTGTAGAACCAGAGGCTGTTGAAGAGAAGACTTTTCAAGGTCCAGAATTTCCCTCAAGCAAGAAAAAAGTTTTAGAGGCCACAGGGTATTTAGCAACAGTTTACTGTTCTGCTTGTGGTGAACAGATAAATACCAGTAAGAGAGGAGATGCACGACGTCATCCTGAACTAAGTGTTCTCATCTGCAGGAGATGTTACAAATTTCATACAAGTGGTCCAATAGAAAAAGATGAAGATGGCCTGGATGAGAATTGTCGTTGGTGCAGCGAAGGTGGAAATTTATTTGGTTGTGATTACTGTCATAATGCATTCTGTCAAGCTTGTATCAAAAGAAATCTTGGACGAGCAGAGTTCCATAAAGTCAAGGATGCTGAAAAGTTTAGATGCTTTGTATGTAATCCTGCACCACTTGCGGCAATGGTAGAACAGTGCAATTCTGTGATAGATACAATTGAAAAAGAATTTCAAAAACTGAATGAAGCAGCCAAAAAAAAGAAAGACTCAGAGAAACAAAAGTCCTCTGGTAAATCTGATAGTAAAGATAAATCATTTCCAGACATTGAAAAGAATAAATCTCTTGTTATAAAGTTGCCTGGTTTAGGAATTAAACATAAAACATCGACACCTAAATCTAAGGAGACTGTGACTACTACAGTCAAACCAACATTACAAGGAAATAAACTCTTCTCACCGATAGTAAAACAGCATCCACCTCAAAGGACTGGGTCTCCAATGTTACAACAGCCAATTATCACTTCTCAAAGGACTGGGTCTCCAATGTTACAACAGCCAGTTATCACTTCTCAAAGGACTGGGTCTCCAATGTTACAACAGCCAGTTATCACTGCTCAAAGAACTCAGTCCCGAAAGTTACAACAGTTTGCTGTCACAAATACTGGTAAACCAAATTTAATATATGTAGAACCACAGAAAGGTACTGCTAAAAATCTAATATATATACAGCCTAGACCACATCAAATGACTATGGTGAGTCAACAAGCTAGAGAACCTTTAAACTGGAATAATGTTACTGTCAAAAATGTTCCCTTTATTACTGATCAGCTGATTAACTCTGCCAATGAAATGATTAGTCTTTTAAAATCAGTCAGAATCAATGTACAAGGTCCAGGCAATGCATTGTCTAATATTGCTTTAGAGGGAAGAAAGACTGCTATAACGTGCATGAAAAGTGGTGTTGACCTGTTTTTAGGACAATTATCAAGCATTGTGGGAACTAATATAGTTCAAGAACCAGCTAAACCTCCAAGTCAGCCATATCAGGCTAGTGGTATAAAGCTGACAGGTGGTAATAGTTCATTAATTAGTACATCAGAAAAAGATCTAATTATATTAGATTCTGAAAATGATGACAGCAGAACAGAAGTAAATGATAAAACAGATAACGCTGATAAAGGTACAGATAGTTCAGAAGAAAATAATATTGAAATGTACATAAAATCTAATGAAATGGACAGTGATGAAATTTCTAGCGAAAATGAACAATCAAATGAAAATAAAGATACAGAGGTAAGAACCTCTATAAAAGAGGAGAAATCTGAAAATATCATTGAAAAAAAGAAAAATTCTCTCAAAAAATCGGATAAAAGAGACACTAACGTTGAAACATCTGACAAATCTGATTCAGAACAAACTGAAGCTGAAAATGATGCTGCTCACTTAGAACTTTTACAGGAGTTACAAGAGTTGTCTGGTACTGTAGAAACTATAGACGATACTGACGATAAAACAAAGGGAGATATACAATCTGAGAAAACGGATGAAATGTCTGGTGATGAAAAATCTGTTGATAAAAAAGAAGAAAAGTCTGGTGATAAGAAGATTAAAAAGTTTATTGATAAAACGGATGATAAAAGGGAGGAGAAGTCTGTTGATAAAAAAGAAGAAAAGTCTGGTGATAAAAAGAATAGAAAGTCTATTGATAAAAAGGATGAAAAGTCTGACGATAAAAGAGAGGAAAAGTCTGGTGATAAAAGAGAGGAAAAGTCTGGTGATAAAAAGAATAGAAAGTCTATTGATAAAAAGGATGAAAAGTCTGATGATAAAAGAGAGGAAAAGTCTGGTGATAAAAGAGAGGAAAAGTCTGGTGATAAAAAGAATAAAAAGTCTATTGATAAAAAGGATGGAAATTCTGATGATAAAAGAGAGGAAAAGTCTGGTGATGAAAGAGAGGAAAAGTCTGGTGATAAAAAGAATAAAAAGTCTATTGATAAAAAGGATGGAAATTCTGATGATAAAAGAGAAGAAAAGTCTGGTGATGAAAGAGAGGAAAAGTCTGGGGTTAAAAAGAATAAAAAGTCTATTGATAAAAAGGATGGAAATTCTGATGATAAAAGAGAAGAAAAGTCTGGTGATGAAAGAGAGGAAAAGTCTGGTGATAAAAAGAATAAAAAGTCTATTGATAAAAAGGATGGAAATTCTGATGATAAAAGAGAAGAAAAGTCTGGTGATAAAAGAGAGGAAAAATCTGGTGATAAAAAGAATAGAAAGTCTATTGATAAAAAGGATGGAAAGTCTGATGATAAAAGAGAAGAAAAGTCTGGTGATGAAAGAGAGGAAAAGTCTGGTGATAAAAAGAATAAAAAGTCTATTGATAAAAAGGATGAAAAGTCTGGTGATAAAAACAATGAAAAATCAGACAATGATGAAGATAAAAGTGATGATTCTAGTAGCAGTGATAGTGACTATGACGATGAAAGTTCAGACAATTCTAAAAAAGATGCTGATTTTGATATTAAAACTGAGAGGAGTACCAGGAGAACTCGTCATAAAGAAGCAGAAAAGAGTAAATTTAAAGAATTGAGAGATAAAAGAAAGGAAAGAGAAAGATCAGCAAAAAAGAAAAGAAAGGAAGAGAAAAAATCAAAAACAGAAGAAACTGATGAGAAATCCAAACGAGATAAAGGAAGAAAGAAGAAAGCAAATTCTAATGAGTCAGATTTTGACGAGGATCTTGAAAATGAAATTGAAAAATTGGAAAAAGAACCATCATTCAAGAAAAAAAAGAAGAAAGAAAATGACAATGAGAAGGAAGAAAAAGACAAAAAAACTGACAAGAGTAAAAAGGATTCAGAAGAGAAATCAAAGAAAGAAAAAAAGAAAGGTACAGATTTAGATGATTTAAGTTCTACAGAAGAAGACAATGCTGATGAAGATGAAAATGAGGATGATAATGAAGATGAGGAAGTTCCAATGGAGCAGGGTGATGACGAAGATGATGATGAAGATACTGTAGATTTAAGTGATAAAGACCAAGAAGATATAGTAGATGATAGCAGTGATTCAGAAATTACATTGTCACCACGTAAAAAGAAAGCGGACAAGAAAAAGAAAGGTAAAAAAGACTCTGAGAGTGAAACTGAAGAAGACTCTGCACCTAAGAAGAAAAGATTAAGAAGTAATCTATTAGATACTAAGTTATCTGATAGTGATTCAGATTTTCTAACAGCAAAAAAAAGTCAAAAAAGGAAGAGGAAAACAGAGTCGTCAACGCAGGAGAGTTCAAAAAGCTCAAGCTCAGAACAAGAGTTTCTGGCTCTTGGTAAAAAGTCTAAAAATAAAGGAAAGCAAAAGAAGAAGAAAGATGGAACAGGAAAAAAAAGGAAAAGAATAAGAAAGATGGTTTCCTCTGATGATGATGAAGACAAGACTGAGGCTGAAAGTGATGAATTAGAAGAGATGAAAAAGAAAAGGAAGAGAAAAAAGAAAGGAGAATCTGATTCAGAAGAGAAGGGAGAAGATGAGGACGAGAACGAGTCTCCCAGTAAAGGAGGGAGGAAACATATTAGAAAAATGATCAAAACTAAGAAATTGAAAGAGGAAACCAAAGCAGCTTCTAAAGCTGAGGAAGAAAGAAGGGAAAGAATTGCTGAAAGACAGAAAAAGTACAATAACATAGTACAGGAAGTAGATGAATCTTCTCCAACCAAAGCTCCTTTGACAAAGCAGTTAATTTTAGAGAGAGACGACGAAGGAAAAGAACCAGTACTAGAGGTAGACAAGGACTTGGTGATGAAATTAAAACCTCATCAGGTGGAAGCTGTTGAGTTTATGTGGAATTGTACTGTAGAAAGTCTGAAGATGTTACAAGATGAGAAAGTAGAAGGTGCTGGCTGTATCCTGGCTCATTGTATGGGACTGGGTAAAACTCTCTCTGTGATAGCTTTCCTTCATACCATGATGGGTAATTATGAAACTACAAACTTCAGCACTGCTTTGATTGTATGTCCTCTAAATACTGTCTTGAATTGGCAACATGAGGTTCAAATGTGGCTAGAGGATAATGAAGTACAGCTTGAGGTATTTGAACTTGCTAGTGTTAAAGTAAATGAAACAAGAGCTAAACTATTAGAGAATTGGCATGAAGACGGAGGAATAATGATTATAGGATATGAAATGTTTCGTAATTTGTCCCAGGGGAGCACCTGTCGTAGTAAAAAACTTAAAAAGATATTTAGTACAACTTTAGTTGATCCAGGTCCAGATTTTGTTGTGTGTGATGAAGGACACATATTGAAGAATGATTCCTCTGCTCTATCTAAAGCCATGAACACCATCAAAACAAGAAGAAGAATAGTATTAACTGGTACACCACTGCAGAACAACCTTGTAGAATATCATTGTATGGTTAACTTTGTCAAGCCAAGTTTGCTTGGAACAAGGAAGGAGTTCTTGAATCGCTTTGTTAATCCAATTACTAACGGTCAGTGTACAGATTCCAGTGGTCACGATGTGAGAGTCATGAAGAGGAGGGCACATGTTCTACATGAAAAATTAGCTGGATGTGTACAGAGAAAAGATTATTCAGCATTAACAAAGTATTTACCACCAAAACATGAGTATGTGATAGCTGTGAGATTAGCTAATGTCCAGTGTGATTTATATAGCAAATATTTAGAAATGGGTGGCTACGGTGGTGCAGAGATGGTCAAGTCAAAAGGGGCTAAGCTCTTCTCAGACTACCAGGCATTGATGAGGATCTGGACTCATCCGTGGGTTCTCAAGATGAATGAAATCAGAAATGAACTGAAAAACATGTATGATGATGAAGACTCGTTCATTGACGATACTAATTCTAGTAGTAATTCTGAATCGGACGCCAAATCCACGGGTTCAGAATCAGATTCAGACAAATCTATGTCCTTTGGTGATAGCGACAGTGACAGTAAGAAGAAACAGAAAGAAAAGAAAGAAGAAAATGAACCTCCAAAAGAGTCATTTGCTGGAGAAATTGTCAAGAAATGGAAAACAAGATCAAGAGGAGATTTCAATGAAGGTGATTTTGAAGCTGAAAGTTTAGATGGAATAAAGAAGCCATTTTCAGATGGATGGTGGGCAGAATTTGTAAAAGAAGAAGATCAGTATAAGCTTGAACTCAGCGGCAAAATAACGTTGTTGTTTGAAATATTAAGGATGTGTGAGGAAATTGGTGATAAAGTATTGGTATTTAGTCAGAGTTTACTTTCACTTGATTTGATAGAGGCTTTCTTAGAACATGTAGATAAGGAGCATGACAAAGCCATGATGAATAAAAAAACTGAGGATGAAGAAAAAGAAAAAGCAAAGAATGAAAAAGAAGGTGACAAAGATAAAGCAAAAGACGAAGAAGAAAACAAAGATAAGACGAAGGATGGAGGAGAAAAAGACAAAGATAAAACAAAGGATGGAGGAGAAAAAGACAAAGATAAAAGTGATGAAGATAAAATAAAGGAGGGAGGAGATAAGAACAAAGATAAAACAAAGGAGGGAGGAGATAAGGACAAAGATAAAAGTGATGAAGATAAAATAAAGGAGGGAGGAGATAAGGACAAAGATAAAAGTGATGAAGATAAAATAAAGGAGGGAGGAGATAAGAACAAAGATAAAAGTGATGAAGATAAAACAAAGGATGGAGGAGATAAGAACAAAGATAAAAGTGATGACAAGGAGGACAGTCAGAAATCTGATGTGTTACCTGTTGAAGAAATGTTTGGTAAGCGATGGTTACAAGGACAAGATTATCTACGTATGGATGGTTCTACAGGAGCTCCACAAAGAGCAGCAATGGCTACAAATTTTAATGATCCTGATAATTACAGATTGAGATTATTCCTAATATCAGCGAAGGCTGAA

Transcript

Protein

ENSQHTP00000029479.1

MSSSRRRKPLVTRKVLSDDEKTNDEDSVLTNGDVKDTEDKDDIPEDLPEGTVIVEPEAVEEKTFQGPEFPSSKKKVLEATGYLATVYCSACGEQINTSKRGDARRHPELSVLICRRCYKFHTSGPIEKDEDGLDENCRWCSEGGNLFGCDYCHNAFCQACIKRNLGRAEFHKVKDAEKFRCFVCNPAPLAAMVEQCNSVIDTIEKEFQKLNEAAKKKKDSEKQKSSGKSDSKDKSFPDIEKNKSLVIKLPGLGIKHKTSTPKSKETVTTTVKPTLQGNKLFSPIVKQHPPQRTGSPMLQQPIITSQRTGSPMLQQPVITSQRTGSPMLQQPVITAQRTQSRKLQQFAVTNTGKPNLIYVEPQKGTAKNLIYIQPRPHQMTMVSQQAREPLNWNNVTVKNVPFITDQLINSANEMISLLKSVRINVQGPGNALSNIALEGRKTAITCMKSGVDLFLGQLSSIVGTNIVQEPAKPPSQPYQASGIKLTGGNSSLISTSEKDLIILDSENDDSRTEVNDKTDNADKGTDSSEENNIEMYIKSNEMDSDEISSENEQSNENKDTEVRTSIKEEKSENIIEKKKNSLKKSDKRDTNVETSDKSDSEQTEAENDAAHLELLQELQELSGTVETIDDTDDKTKGDIQSEKTDEMSGDEKSVDKKEEKSGDKKIKKFIDKTDDKREEKSVDKKEEKSGDKKNRKSIDKKDEKSDDKREEKSGDKREEKSGDKKNRKSIDKKDEKSDDKREEKSGDKREEKSGDKKNKKSIDKKDGNSDDKREEKSGDEREEKSGDKKNKKSIDKKDGNSDDKREEKSGDEREEKSGVKKNKKSIDKKDGNSDDKREEKSGDEREEKSGDKKNKKSIDKKDGNSDDKREEKSGDKREEKSGDKKNRKSIDKKDGKSDDKREEKSGDEREEKSGDKKNKKSIDKKDEKSGDKNNEKSDNDEDKSDDSSSSDSDYDDESSDNSKKDADFDIKTERSTRRTRHKEAEKSKFKELRDKRKERERSAKKKRKEEKKSKTEETDEKSKRDKGRKKKANSNESDFDEDLENEIEKLEKEPSFKKKKKKENDNEKEEKDKKTDKSKKDSEEKSKKEKKKGTDLDDLSSTEEDNADEDENEDDNEDEEVPMEQGDDEDDDEDTVDLSDKDQEDIVDDSSDSEITLSPRKKKADKKKKGKKDSESETEEDSAPKKKRLRSNLLDTKLSDSDSDFLTAKKSQKRKRKTESSTQESSKSSSSEQEFLALGKKSKNKGKQKKKKDGTGKKRKRIRKMVSSDDDEDKTEAESDELEEMKKKRKRKKKGESDSEEKGEDEDENESPSKGGRKHIRKMIKTKKLKEETKAASKAEEERRERIAERQKKYNNIVQEVDESSPTKAPLTKQLILERDDEGKEPVLEVDKDLVMKLKPHQVEAVEFMWNCTVESLKMLQDEKVEGAGCILAHCMGLGKTLSVIAFLHTMMGNYETTNFSTALIVCPLNTVLNWQHEVQMWLEDNEVQLEVFELASVKVNETRAKLLENWHEDGGIMIIGYEMFRNLSQGSTCRSKKLKKIFSTTLVDPGPDFVVCDEGHILKNDSSALSKAMNTIKTRRRIVLTGTPLQNNLVEYHCMVNFVKPSLLGTRKEFLNRFVNPITNGQCTDSSGHDVRVMKRRAHVLHEKLAGCVQRKDYSALTKYLPPKHEYVIAVRLANVQCDLYSKYLEMGGYGGAEMVKSKGAKLFSDYQALMRIWTHPWVLKMNEIRNELKNMYDDEDSFIDDTNSSSNSESDAKSTGSESDSDKSMSFGDSDSDSKKKQKEKKEENEPPKESFAGEIVKKWKTRSRGDFNEGDFEAESLDGIKKPFSDGWWAEFVKEEDQYKLELSGKITLLFEILRMCEEIGDKVLVFSQSLLSLDLIEAFLEHVDKEHDKAMMNKKTEDEEKEKAKNEKEGDKDKAKDEEENKDKTKDGGEKDKDKTKDGGEKDKDKSDEDKIKEGGDKNKDKTKEGGDKDKDKSDEDKIKEGGDKDKDKSDEDKIKEGGDKNKDKSDEDKTKDGGDKNKDKSDDKEDSQKSDVLPVEEMFGKRWLQGQDYLRMDGSTGAPQRAAMATNFNDPDNYRLRLFLISAKAE

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00176	SNF2-rel_dom	SNF2-related domain	Domain	Interproscan
PF17981	ADD_ATRX	Cysteine Rich ADD domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000330	Domain	SNF2, N-terminal	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR025766	Domain	ADD domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR038718	Homologous_superfamily	SNF2-like, N-terminal domain superfamily	Interproscan
IPR041430	Domain	ATRX, ADD domain	Interproscan
IPR044574	Family	ATPase ARIP4-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45797	RAD54-LIKE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0140658	Molecular Function	ATP-dependent chromatin remodeler activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-