Gene detail

Detailed information of ENSQHTP00000005005.1 in Bathymodiolus brooksi Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSQHTP00000005005.1	PERFORIN-LIKE PROTEIN 1	1	96143601	96172594	+

Gene Structure

More details in Jbrowse Sequence

CDS

ENSQHTT00000005005.1

ATGCATCTGTTAAGGTTTGTTTCTAACTTTGCCATCGTAAATTTAGATATCAAGACGCCTTACTCAATAACCTTTGTGGGTCTATCCACATCACGGACAACATGTGTCCATGAACTTGGGCATGCGCTTGGTCTTCACCACGAACAGAAAAGTCCAATTCATGACGATTATCTGCGAATAAACCAGAATAATATCGAACCAGGTAACACATTAACACTTAAAATGAGATGCCCCCACTTTACGAAGGAATGTAAAGATGGATATGTAGCTTATATCAGAAATACATGTACATGTAGATGTCCTAAAGGACTTGATCCAGAAACAGGATGTACAACAGTGTATCATGGAGATAAACGTCTGAAGAGTATTACTTGGCCTCAATCTGAATTTTCTATGTTGAAACCACAAGATGGATGCCCAACTGGGTTTGAAGAAGGGTCAATGACCCAGTATGTGGCGGGAGGAAAAGTATCTGGACATTTTAACTTTGACACTAAATATGATAATGATCACTTTGACTTTAAATTTTGTACCAAGACCAAAAAATCACAAAGTAGCAAGGCTGCGTGGGAGCCAGGACAATACTGTATATTTAGCTATAACGGAGTTTGTCCTAAAGGTATTGTTGTAGCGGATCCATTACCTGATGGAAAATATGGCAAGAAAATGGTTTGGCATTTTTGCTGTAGAGAAGATGGCACGTTTAAGGATCCCCTTTACTTGCCAACAAAAGAACCATTTTCACTTTTCCCTAAAGGTAGAGATTGCCAGCAGGTAAAAGGTAAGCATATTATTCTGTGGAGCACACATTGTGAAACAAACAGTACCTGTTTTCACCTCTGCAGTTTCCGTTTCCTTCTCCTCGAAAAGCATTGTGAGGAACGAAACAATGTACAATTCTCGTGTTTTGAGAATGTCACGGTCATCAGTCCAGAAAATACAAAAATCAAGTTGGACTTTGAAACATTTGACCTTGAATCATCAGTTAGTAAAGGAACAGGCTTCCCAAAATGTGAAGATTCTCTAGAAATACGAACGACATTGCCAGGACACCCAGTTAATACAAAGATTATACAAATGAATACTGTTTTATTTTATATATCAGACGAGAAGATGTGTTATTCAAAACGGGGAGAGGATTACAGGGGATTTGTAAATGTGACCAGGTTGTTTGCATCATGCTTACCCTGGACAAATGTGCAACATTGTCCGCACCACGCCTTCCACCCAGGAGATTTGGACGATGATTTAGTTGATAATTACTGCAGAAACCCTGGTAGTGGAACTAGGCCGTGGTGTTACACTCACTACGAAGACTGTAGTAGGGATTACTGTGACCCATGTGCACTGGAGAACTGTTACGATTTGCTTGAAGACTGTCACAATTTAGAAAAATCAGATTCTACATTTTGTCATTCAAATGTCGAAGCACAACGCATTTGTAGGAAAAGTTGTGGTTTTTTCACAAAAATTAAATGTCTCACTCCACCAGAGTTAGAGGATGCAAAAAGTATGGGGAAATTAAGAAAACGCTACAAAGTTGGTGAGATTGCAATGTTCAAATGTAACACTGGCATAGAAGAGGAAGAAAGGGTGTGTCTGTCTGATGGAAGTTGGTCTGGTGTCTATTTGGTTTTTTTTAAATGCATTGTAGGATGTCCAAATGGTTGGATACCATTCAGAAAACATTGTTATAAATGGTTTAATTCATATGAAAACTGGGAAGAAGTAACATGTCCGTTACCACCCATACCACCAACTGTTACCATGCTAACCAAAGACAACAAACTCCACCCTGGTAAAATGATACAGTACAAGTGTAAAGATGATTTCATCCTCCTAACTGGATCCCTCAGGAGAACATGCTTGCTTTCCGGTACTTTAACAGGAACTATGCCTGCTTGTATAAGTAAGTATCTTGAGAAAACAAGTTACTGTCTGGTTCAACTACGTCAAAGATCACAAGATGGGATGGATAGCATGGCGTACACAGCTGACAACGATGCATTGAAGATACACAAATCAGGAAAGCTAGTAGAATGGCATTTCTACAGTATATACGATGGAGAGGTTGCCTTTCAAGTTTGGAGAAAAAGTCAAAAGAAGTATTTCTACATATATTATCAAAAGTACACTGTGTACTCTAAATATGTTCCAAATTATATTTTAAAATTTGCATTATATAATATTGCAAGAATACATATTTTTGTACTCGTATACATATTAACTGAATTGAACGAGCACTTCATTGAGAGGAAACCAACGAATTATTTAAGACATACATTCACCATGTACAATTATTGTTGGTTCTTTTAA

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00051	Kringle	Kringle domain	Domain	Interproscan
PF00084	Sushi	Sushi repeat (SCR repeat)	Domain	Interproscan
PF01400	Astacin	Astacin (Peptidase family M12A)	Domain	Interproscan
PF16977	ApeC	C-terminal domain of apextrin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000001	Domain	Kringle	Interproscan
IPR000436	Domain	Sushi/SCR/CCP domain	Interproscan
IPR001506	Domain	Peptidase M12A	Interproscan
IPR013806	Homologous_superfamily	Kringle-like fold	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR018056	Conserved_site	Kringle, conserved site	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR031569	Domain	Apextrin, C-terminal domain	Interproscan
IPR035976	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan
IPR038178	Homologous_superfamily	Kringle superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19324	PERFORIN-LIKE PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-