Detailed information of CsqKR_Scaf69_83.13 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf69_83.13CARNITINE O-ACYLTRANSFERASEchr72819881528213935+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00755Carn_acyltransfCholine/Carnitine o-acyltransferaseFamilyInterproscan
PF01120Alpha_L_fucosAlpha-L-fucosidaseDomainInterproscan
PF16757Fucosidase_CAlpha-L-fucosidase C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000542FamilyAcyltransferase ChoActase/COT/CPTInterproscan
IPR000933FamilyGlycoside hydrolase, family 29Interproscan
IPR013780Homologous_superfamilyGlycosyl hydrolase, all-betaInterproscan
IPR016286FamilyAlpha-L-fucosidase, metazoa-typeInterproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR023213Homologous_superfamilyChloramphenicol acetyltransferase-like domain superfamilyInterproscan
IPR031919DomainAlpha-L-fucosidase, C-terminalInterproscan
IPR039551DomainCholine/carnitine acyltransferase domainInterproscan
IPR042231Homologous_superfamilyCholine/Carnitine o-acyltransferase, domain 2Interproscan
IPR042572Homologous_superfamilyCarnitine o-acyltransferase, N-terminalInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22589CARNITINE O-ACYLTRANSFERASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004095Molecular Functioncarnitine O-palmitoyltransferase activityInterproscan
GO:0004560Molecular Functionalpha-L-fucosidase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0006004Biological Processfucose metabolic processInterproscan
GO:0006635Biological Processfatty acid beta-oxidationInterproscan
GO:0016746Molecular Functionacyltransferase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for CsqKR_Scaf69_83.13 global RNA-seq network
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