Detailed information of CsqKR_Scaf61_14.17 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf61_14.17RING FINGER PROTEIN 31-RELATEDchr387318558745539+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|ZnF|NZF
Ubiquitin FamilyE3|E3 activity|RBR

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01485IBRIBR domain, a half RING-finger domainDomainInterproscan
PF16678HOIP-UBAHOIP UBA domain pairFamilyInterproscan
PF18091E3_UbLigase_RBRE3 Ubiquitin Ligase RBR C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR001876DomainZinc finger, RanBP2-typeInterproscan
IPR002867DomainIBR domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR026254FamilyE3 ubiquitin-protein ligase RNF31-likeInterproscan
IPR032065DomainE3 ubiquitin-protein ligase RNF31, UBA-like domainInterproscan
IPR036443Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan
IPR041031DomainRNF31, C-terminalInterproscan
IPR044066DomainTRIAD supradomainInterproscan
IPR047540DomainE3 ubiquitin-protein ligase RNF31-like, BRcat domainInterproscan
IPR047541DomainE3 ubiquitin-protein ligase RNF31-like, modified RING finger, HC subclassInterproscan
IPR047542DomainE3 ubiquitin-protein ligase RNF31-like, Rcat domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR16004RING FINGER PROTEIN 31-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0036435Molecular FunctionK48-linked polyubiquitin modification-dependent protein bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0070530Molecular FunctionK63-linked polyubiquitin modification-dependent protein bindingInterproscan
GO:0071797Cellular ComponentLUBAC complexInterproscan
GO:0097039Biological Processprotein linear polyubiquitinationInterproscan
GO:1990450Molecular Functionlinear polyubiquitin bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for CsqKR_Scaf61_14.17 global RNA-seq network
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