Detailed information of CsqKR_Scaf40_8.23 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf40_8.23TRANSPOSONchr1467319846734891-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyHTH

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05225HTH_psqhelix-turn-helix, Psq domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR036462Homologous_superfamilyFumarylacetoacetase, N-terminal domain superfamilyInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR19303TRANSPOSONInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004334Molecular Functionfumarylacetoacetase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0009072Biological Processaromatic amino acid metabolic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for CsqKR_Scaf40_8.23 global RNA-seq network
TOP