Gene detail

Detailed information of CsqKR_Scaf35_24.16 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf35_24.16	AXIN INTERACTOR, DORSALIZATION-ASSOCIATED PROTEIN	chr1	25746872	25756058	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

CsqKR_Scaf35_24.16

TTTAGAAAATGGCTGCGTCCATGATTGTGTTTATTTACAAGTTTAAAAAATCCGAAATAACTTTTTAAAAATAATTTGTTATTTACAAAGAAATAGATACAACGAAAATAAGAATGATAAATATTTTATTCACTAACAAATATAAGTTGCAGAACTACAATGGAAGATCAAGAAAGCTTAGTTGTGAAATGGCATGATGTTTTCAAGGAAGCAATTGATTTTGATGCATGGGGTCAACCTCTTGAAGCAGCAGAAGAGTATCAGAAATTATCTAAACAGCTACATCAACATGCATCCATTGACCATCCTCTCTTCACAGATGAACAAAAGAAAATACTTGACAAAATTACTGTTTGTTTAGATGCACGCTGCAAATCATTACAGCATCGTGGGACCATTGAAGGGGTTTCTTTGGATGACTTACGCAGTCTGGTATCTACATTAAGGAATCTAGTTGTTACAACAAGTGGACATTTTCCTGTTGACGTGACAGTTGCTCAGATACAAACACGCAAATATCCCAGAATAAGTCTTTCAGATAATGGGGTTTCAGATGAAGACAAGTCTGTGCAGAAAACCCTTGGTAACATTCTACCAAAGCCCTTATATATACCTGGGAAAACACTGTTAACCATACGAGTTGAGAAGATTGCATTGAAAGATCCATCTCAATTCATAGATCCTTTTATTACTGTATCTGTTAAAGATGCCAATGGATATGACATGACAGCAAGACAAGACACGCCAACAGCAACAGAAAAAACTGACTCGTGTATTTTTTTCAATGTAGATGTCCACATCCAGAAAACCGTTGAAAGCCTTCCCCCAGGATTTGCCATATTCTTTGAACTGAAACATTATAAACCCAAAAAGAAGAGTGTTAGTACCAAGTGTTGGGCATTTCTGGAGAAAGATGAAATCAAAGATGGATCCCTCTCATTAGAACTTTACAAGAAACCAACTGACAGTCAAAGGAAGAAACTTAGACTGCTGACAGTGAAACCTTTGTATTTATACCTTAAACTGTCCCTTGTATCATAATAATCTTAAATTCTGCTGTTCTTAATTGTAGAATTTGTGACATCTTTTTCTTTTTTTTTTTTTTTTTTTTTTAAAGAAACATCTTTATTAATATACTGATTTTTACTTCTAGTCCATCTTTGTTATTGTTACACCATAACAGAATCGAGGAGCCTGAAAAATATCCACTATGTGTGCATATTAAAATTGAAAATCAGCTGATAATCATCTTTAGGCCAGTAGTGAAAGATTTACTGTTATCTTATTTTTGTTACGCATTTCTTTAAAATGTTGTCATAGAACTTTTTGTTAAAAATTATTTTATGTCATGAAAGTGGAATTTATATTTAAACCATTGTTTGGTGGGTTTTTTTCAAAACTGTTTTACCCATAATCAAATGTTACATTTCCAAAGATTTTTGTTATATGAATAATTTTTAATGTGCATATATAAATTTCTTTCATACCATGTTGGTAGTGCAGAAATTTTTGTATAATGGATATTTCATTGCTTTGCTATATTAATGATTATTAAACATGTATTGGATGTTTATTTTTTTTATAAAAGGAATTAAGACAGGAAATCTTTTTGTGCCACAACACCTGTTATCAGCAGCAAGGTACCTTATACAGTTATATAAGTACTTTCCAGCAGCAAGGTATTTTTTACAGTTATAAAGGTACTTTCCTGTAGACAAGATCAGCAGCAATTTATTGTTTTATTATTATATAGGTATTTTCCTGTAGACAAGATTAATAGTAAGGTGTTTTTTTTTTTACTGTTATCTTGCTCTTTCCTGTAGACAAGATGGTTAAAGTATAATGAAAATCTGAGCATATCATTCTTAAAAACAGTTCTTTAACCACACCTAGGATGATGTTTTACAACATGTCAGTAACTGGGTTTTTTTTTGATGTGGCTGTACTAAGCACAAACAAGATGAATAATTAAAATATGAAAAAGAGCCATGTATTTTAGAAATATACTATGTAGGGTAGTTAGTTAATTTTGCATTATTTATTTACTTTTGTTGGTTTTTAATATATATGCATACTTCCTGTTATTCTTGTTACATATACTTTAATCATTTGTTATTTTACTTATTGTTTATGTGAATATTAATGTGTATTTTTAAATAGATCTGTTTTATGCCAAATAAAAGAACTCGTTCCTGCAAAATGAAGTAAATTAATTTCTTCTTTATATATATTTAATATTGTGATTACTTATTAATTTTAGTATATATTGTTTTATACATACACAGACATCAGATCTATTATTTTAAATGCTATTATAAATTAAGCAATATAAAGTGTTTGTATTATAATTTATATATATAAATATATATTTTTTTTTTCAGTGTAATAAAATACTTACAGATAACAAGGTGGCATGTTTTCTGTTTAAGTATATGGATTTCACAAGTGAAGAATGACATATAAATTTCTGATTACATCTATTTAAAAGGCTTTGTCAATATAAAATAAAAATGTATTGTATGTGGCATTTGTTATAAAGTCACAAAATACTGCAAACATATTTCTTGAGATGGAATTTTTCTGTGGCCACTAATTTCTGTTAATAATGTACGCATAGTAATAAGCAAAAATAAACTTTGAAAACTACAAATATAATGTTAGCATTACAAATTTGATGACAATTCAAAATATTTCCAATATAAACCTGGTACCATTTTTTAACATTACAGATACATGATTATGTTTGTTTATATATTATCTGTGGCTATTTCTGTTTTCTCATATAATTTCTGGATTACAATCTTGGTGTCATGAAAAATACTCAGTATACTGTAATCTTTTTTACTGTAATGTGATATAAACATCAATCTAACACATATATCCTTCAGTTGCTGAAAAATTACAATTTCTTGAACATAATACAAACAAAAAAAACATTTCCATACTACTTGGTTTATTAGGTATACATTCAATTTTAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08910	Aida_N	Aida N-terminus	Family	Interproscan
PF14186	Aida_C2	Axin interactor dorsalisation-associated protein, C-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023421	Domain	Axin interactor, dorsalization-associated protein, N-terminal	Interproscan
IPR025939	Domain	Axin interactor dorsalization-associated protein, C-terminal	Interproscan
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR036818	Homologous_superfamily	Axin interactor, dorsalization-associated protein, N-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28654	AXIN INTERACTOR, DORSALIZATION-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0035091	Molecular Function	phosphatidylinositol binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf35_24.16 global RNA-seq network