| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf266_5.8 | UBIQUITIN-PROTEIN LIGASE E3A-RELATED | chr15 | 27349622 | 27370114 | + |
| CDS | |||||
| CsqKR_Scaf266_5.8 | |||||
| Transcript |
| CsqKR_Scaf266_5.8 |
| Protein |
| CsqKR_Scaf266_5.8 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity|HECT |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00415 | RCC1 | Regulator of chromosome condensation (RCC1) repeat | Repeat | Interproscan |
| PF00632 | HECT | HECT-domain (ubiquitin-transferase) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000408 | Repeat | Regulator of chromosome condensation, RCC1 | Interproscan |
| IPR000569 | Domain | HECT domain | Interproscan |
| IPR009091 | Homologous_superfamily | Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | Interproscan |
| IPR035983 | Homologous_superfamily | HECT, E3 ligase catalytic domain | Interproscan |
| IPR051709 | Family | Ubiquitin ligases and GTPase regulators | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45622 | UBIQUITIN-PROTEIN LIGASE E3A-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004842 | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf266_5.8 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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