| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf247_16.22 | SRCR DOMAIN-CONTAINING PROTEIN | chr15 | 11435559 | 11458411 | + |
| CDS | |||||
| CsqKR_Scaf247_16.22 | |||||
| Transcript |
| CsqKR_Scaf247_16.22 |
| Protein |
| CsqKR_Scaf247_16.22 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00051 | Kringle | Kringle domain | Domain | Interproscan |
| PF00057 | Ldl_recept_a | Low-density lipoprotein receptor domain class A | Repeat | Interproscan |
| PF00089 | Trypsin | Trypsin | Domain | Interproscan |
| PF00530 | SRCR | Scavenger receptor cysteine-rich domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000001 | Domain | Kringle | Interproscan |
| IPR001190 | Domain | SRCR domain | Interproscan |
| IPR001254 | Domain | Serine proteases, trypsin domain | Interproscan |
| IPR001314 | Family | Peptidase S1A, chymotrypsin family | Interproscan |
| IPR002172 | Repeat | Low-density lipoprotein (LDL) receptor class A repeat | Interproscan |
| IPR003609 | Domain | PAN/Apple domain | Interproscan |
| IPR009003 | Homologous_superfamily | Peptidase S1, PA clan | Interproscan |
| IPR013806 | Homologous_superfamily | Kringle-like fold | Interproscan |
| IPR016187 | Homologous_superfamily | C-type lectin fold | Interproscan |
| IPR017448 | Domain | SRCR-like domain | Interproscan |
| IPR018056 | Conserved_site | Kringle, conserved site | Interproscan |
| IPR023415 | Conserved_site | Low-density lipoprotein (LDL) receptor class A, conserved site | Interproscan |
| IPR033116 | Active_site | Serine proteases, trypsin family, serine active site | Interproscan |
| IPR036055 | Homologous_superfamily | LDL receptor-like superfamily | Interproscan |
| IPR036772 | Homologous_superfamily | SRCR-like domain superfamily | Interproscan |
| IPR038178 | Homologous_superfamily | Kringle superfamily | Interproscan |
| IPR043504 | Homologous_superfamily | Peptidase S1, PA clan, chymotrypsin-like fold | Interproscan |
| IPR050686 | Family | SRCR-S1 Scavenger Receptor | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48071 | SRCR DOMAIN-CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004252 | Molecular Function | serine-type endopeptidase activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006508 | Biological Process | proteolysis | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf247_16.22 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
