Gene detail

Detailed information of CsqKR_Scaf20_22.10 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf20_22.10	LEISHMANOLYSIN-LIKE PEPTIDASE	chr11	6189286	6206619	-

Gene Structure

More details in Jbrowse Sequence

CDS

CsqKR_Scaf20_22.10

ATGGTGACGGTCGTGTGGATGACACATGCTGTCATCTTCTTAGTCTTAGTCTGCGAGAGCTGCAAAAGATCTGTGACGGCAGCAACAGCGCACAGAACATGCAATCATGAAATACACAAGCAACACGAGATATTTTATGGTGTTGATATTGAGCCTAAGCACACTGTGATGAAACGAAGTGTTGATCAGCCTCTTAGAATCCATCTCCACTACGACAACAGCCTTCTAGAACTTCCGCACCAACACAGAGATTTAGTGAAGAAAACTGTTCTACAGGCTGTACAGTTCTGGGAGAGTACACTAAGAGTTCGTGCAACAAGAAAACCAATCAGACTCAGAAAGCAGTGTTTAGATAATCGAGTGAGGTACGAAGATGGTCAGGTGTATTGTGTGGAGGGGTGCAGTTCTGAGACTAAATGTGGGGATATTGTGATACCCGCAGAACACCAACAAGGTTGTCTTTTCTGGAACAGTGTCACAGACAGGTACGAAGAGGAAGGGGTTTCGGGTAGCGGCGTCAACAACACAGACTTCATTTTGTACGTTGCAACCGTGCATTCGAAACGTTGTCAACTTGGCAGTACTGTAGCCTATGCAGCTCATTGCCAGCAAGAAAGAGCTTTAGACAGGCCTGTAGCTGGATATTTCAGCGTTTGTCCTAAGTCAATATCTGTGGATCGATTGGAACAACTTCAGCTACTGTCAACTATGAAACATGAGATACTCCATGCTTTGGGTTTTACAGCTGGTCTGTATGCCTTTTATCGTGATGAAAATGGAAATCCACTGACAGAAAGAAATCCTTTGTCTAACAAACCAAGACAGTTCAATAAAAAACTGAGCATGTACCAGTGGAGTGAACGAGTTGTGAAAACAGTCTATCGTGAAAACTGGAAACTAAGAAATGGTCCTGTGACTAAAATAATGAAGGTCATGGTCACACCAAAGGTGAAGGCTGAGGTCAGGTCACACTTCAACTGTTCTGATCTGGAAGGCGCTGAACTGGAAGATCAGGGGGTTGATGGAACCTCACTGACACACTGGGAAAAGCGAATATTTGAAAATGAAGCAATGACTGGGACATACACACAGAATTCTGTAATATCTCGGATTACCTTAGCAATGATGGAAGATACTGGATGGTACAAGGCAAATTATGAAAAAGCTGAAATGTATGAATGGGCAAAGAACCTTGGTTGTGACTTTGTTAAAAGGAGCTGTTACGACTGGATGCAGATGAAGAAAAAAAGTGGTGAGGACATATATCCATACTGTGAACAAGTGAAGCGTGGACAGCTGTGGACAGACTGCAGTAACAACAGACACTCTGTCGCCCTATGCAATCTGGTGGAATACAGTCACCCATTACAGCCAGAGTACCAGTATTTTAGCTCACTTGAAGGTGTGGCAAGTTCTGAAGTGAACAGATTTGGAGGGTCAGTTCAGTTGGCTGATTTTTGTCCATTTCTACAGGAATTTTCATGGACAAATCATGATGAAGTTCTTCGTGGGTCAAGCTGCAGACATCAAGAAAATAGCCTTAGTGAATCAAATAACTTTTTTGGTGAAAAGTACGGCAACCGATCAAAATGTTTCAACCATGCAAACAGATGGTTTTTGCAGCACTGTTACTCGATAGACAGTCCACAGCACAGTGGCAGTGGCTGTTACGAGTACAAATGCAGTGCTGACATTGGTTTGACAATATTTGTAGAAGGAAATGCATATCGCTGCTATAAAGAAGGGCAGATAATTAAAGTACAGTATGTCTCACAGAGTTATCTTCACAAAGGATCTCTTATTTGTCCAAACTGCCAGGAAGTTTGTCAAGAATCTGGAGTTACCTGCCCTGCTGACTCAGACGTCCCTCCACAGAAAGAGTTATCTCTGAGAGCCCCTTGTTGTGCATTTTCATTTTCACCAAATGTTTATGCAATAATATTTTACCTCGTTTTTGTTTTTTTCGTACGTACATCATCTTGA

Transcript

CsqKR_Scaf20_22.10

TGTACCTCAGCACCAGGTTAGAGAAGATCTACTTCCGTTTCAGTGATAAGTTGTTTTCGTTTTTAATCGTTATATTATAGTATTTTTTGTTATTACCTTTTGTTAAAAATTATTTGGTGTTCTTACTTTTGTTTTGTTATCAGTTTTATAACGCTTTCAGACTACTTACGCAACAAGAGTCATAACAAAAGCAATTGTTTTTCATGCCGGAAAGATAATCATAATGCCAATTTCGGCGTCAAATTACAAGTGCCAAGGGACACAACTAAAGTTTTCGTGAAGTAAACGGAGACATGACTTTCTTGGTACGGTACCACCCCTTCCGGAGACAGCTGCTGTTTGTTTTTGTTCAGATTTAAAATGGATCGTATAACTTACAAGTCCAGAAAAGGCTGTGATGACCGTGGGTAAATTCTATTTTGTCGACGGCAGCAGGATCTTTCTCTTTGTTTCGGCTGTGCATACCACCGTCACGTCGTCACGGAAATGGTGACGGTCGTGTGGATGACACATGCTGTCATCTTCTTAGTCTTAGTCTGCGAGAGCTGCAAAAGATCTGTGACGGCAGCAACAGCGCACAGAACATGCAATCATGAAATACACAAGCAACACGAGATATTTTATGGTGTTGATATTGAGCCTAAGCACACTGTGATGAAACGAAGTGTTGATCAGCCTCTTAGAATCCATCTCCACTACGACAACAGCCTTCTAGAACTTCCGCACCAACACAGAGATTTAGTGAAGAAAACTGTTCTACAGGCTGTACAGTTCTGGGAGAGTACACTAAGAGTTCGTGCAACAAGAAAACCAATCAGACTCAGAAAGCAGTGTTTAGATAATCGAGTGAGGTACGAAGATGGTCAGGTGTATTGTGTGGAGGGGTGCAGTTCTGAGACTAAATGTGGGGATATTGTGATACCCGCAGAACACCAACAAGGTTGTCTTTTCTGGAACAGTGTCACAGACAGGTACGAAGAGGAAGGGGTTTCGGGTAGCGGCGTCAACAACACAGACTTCATTTTGTACGTTGCAACCGTGCATTCGAAACGTTGTCAACTTGGCAGTACTGTAGCCTATGCAGCTCATTGCCAGCAAGAAAGAGCTTTAGACAGGCCTGTAGCTGGATATTTCAGCGTTTGTCCTAAGTCAATATCTGTGGATCGATTGGAACAACTTCAGCTACTGTCAACTATGAAACATGAGATACTCCATGCTTTGGGTTTTACAGCTGGTCTGTATGCCTTTTATCGTGATGAAAATGGAAATCCACTGACAGAAAGAAATCCTTTGTCTAACAAACCAAGACAGTTCAATAAAAAACTGAGCATGTACCAGTGGAGTGAACGAGTTGTGAAAACAGTCTATCGTGAAAACTGGAAACTAAGAAATGGTCCTGTGACTAAAATAATGAAGGTCATGGTCACACCAAAGGTGAAGGCTGAGGTCAGGTCACACTTCAACTGTTCTGATCTGGAAGGCGCTGAACTGGAAGATCAGGGGGTTGATGGAACCTCACTGACACACTGGGAAAAGCGAATATTTGAAAATGAAGCAATGACTGGGACATACACACAGAATTCTGTAATATCTCGGATTACCTTAGCAATGATGGAAGATACTGGATGGTACAAGGCAAATTATGAAAAAGCTGAAATGTATGAATGGGCAAAGAACCTTGGTTGTGACTTTGTTAAAAGGAGCTGTTACGACTGGATGCAGATGAAGAAAAAAAGTGGTGAGGACATATATCCATACTGTGAACAAGTGAAGCGTGGACAGCTGTGGACAGACTGCAGTAACAACAGACACTCTGTCGCCCTATGCAATCTGGTGGAATACAGTCACCCATTACAGCCAGAGTACCAGTATTTTAGCTCACTTGAAGGTGTGGCAAGTTCTGAAGTGAACAGATTTGGAGGGTCAGTTCAGTTGGCTGATTTTTGTCCATTTCTACAGGAATTTTCATGGACAAATCATGATGAAGTTCTTCGTGGGTCAAGCTGCAGACATCAAGAAAATAGCCTTAGTGAATCAAATAACTTTTTTGGTGAAAAGTACGGCAACCGATCAAAATGTTTCAACCATGCAAACAGATGGTTTTTGCAGCACTGTTACTCGATAGACAGTCCACAGCACAGTGGCAGTGGCTGTTACGAGTACAAATGCAGTGCTGACATTGGTTTGACAATATTTGTAGAAGGAAATGCATATCGCTGCTATAAAGAAGGGCAGATAATTAAAGTACAGTATGTCTCACAGAGTTATCTTCACAAAGGATCTCTTATTTGTCCAAACTGCCAGGAAGTTTGTCAAGAATCTGGAGTTACCTGCCCTGCTGACTCAGACGTCCCTCCACAGAAAGAGTTATCTCTGAGAGCCCCTTGTTGTGCATTTTCATTTTCACCAAATGTTTATGCAATAATATTTTACCTCGTTTTTGTTTTTTTCGTACGTACATCATCTTGATGTATAGCTAGCTTTTAAAATGTTTTACTTGTTTTTAATTTTATTTGTGTAGACATTTTTATTTTTGAACCCGCTATTTGAAAGTTGTTATTTTAGTTATCATATCAGAGTAAAGATATATCTGTAGAGTTAATGATTGTAACTTCTGGTGCTCATCTTTTCTGTGCATTGCTCTGTTTTGCTGTGTGTCAGTATTTATGTGTGTGTGTTTGTGTGTGTGTTTGTGTGTTTGTTTGTGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTTTGTTTT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01457	Peptidase_M8	Leishmanolysin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001577	Family	Peptidase M8, leishmanolysin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10942	LEISHMANOLYSIN-LIKE PEPTIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0007155	Biological Process	cell adhesion	Interproscan
GO:0008233	Molecular Function	peptidase activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf20_22.10 global RNA-seq network