Detailed information of CsqKR_Scaf1_38.12 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf1_38.12TRANSKETOLASEchr71593101015961194-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00456Transketolase_NTransketolase, thiamine diphosphate binding domainDomainInterproscan
PF02779Transket_pyrTransketolase, pyrimidine binding domainDomainInterproscan
PF02780Transketolase_CTransketolase, C-terminal domainDomainInterproscan
PF14959GSAP-16gamma-Secretase-activating protein C-termFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR005474DomainTransketolase, N-terminalInterproscan
IPR005475DomainTransketolase-like, pyrimidine-binding domainInterproscan
IPR009014Homologous_superfamilyTransketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain IIInterproscan
IPR020826Binding_siteTransketolase binding siteInterproscan
IPR028010DomainGamma-secretase-activating protein, C-terminal domainInterproscan
IPR029061Homologous_superfamilyThiamin diphosphate-binding foldInterproscan
IPR033248DomainTransketolase, C-terminal domainInterproscan
IPR049557Conserved_siteTransketolase conserved siteInterproscan
IPR051424FamilyTransketolase-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR43195TRANSKETOLASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004802Molecular Functiontransketolase activityInterproscan
GO:0030976Molecular Functionthiamine pyrophosphate bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for CsqKR_Scaf1_38.12 global RNA-seq network
TOP