Detailed information of CsqKR_Scaf195_2.16 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf195_2.16ZINC FINGER, RING/FYVE/PHD-TYPEchr344712904475252+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05605zf-Di19Drought induced 19 protein (Di19), zinc-bindingDomainInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF18574zf_C2HC_14C2HC Zing finger domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR003903Conserved_siteUbiquitin interacting motifInterproscan
IPR008598DomainDrought induced 19 protein type, zinc-binding domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR034734DomainZinc finger C2HC RNF-typeInterproscan
IPR051438FamilyRNF E3 ubiquitin-protein ligaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46016ZINC FINGER, RING/FYVE/PHD-TYPEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for CsqKR_Scaf195_2.16 global RNA-seq network
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