| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf188_0.6 | PUTATIVE PHOSPHOTRANSFERASE | chr3 | 15534344 | 15541279 | + |
| CDS | |||||
| CsqKR_Scaf188_0.6 | |||||
| Transcript |
| CsqKR_Scaf188_0.6 |
| Protein |
| CsqKR_Scaf188_0.6 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01885 | PTS_2-RNA | RNA 2'-phosphotransferase, Tpt1 / KptA family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002745 | Family | Phosphotransferase KptA/Tpt1 | Interproscan |
| IPR042080 | Homologous_superfamily | RNA 2'-phosphotransferase, N-terminal domain | Interproscan |
| IPR042081 | Homologous_superfamily | RNA 2'-phosphotransferase, C-terminal domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12684 | PUTATIVE PHOSPHOTRANSFERASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000215 | Molecular Function | tRNA 2'-phosphotransferase activity | Interproscan |
| GO:0006388 | Biological Process | tRNA splicing, via endonucleolytic cleavage and ligation | Interproscan |
| GO:0008033 | Biological Process | tRNA processing | Interproscan |
| GO:0016740 | Molecular Function | transferase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf188_0.6 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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