| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf172_16.15 | CHONDROITIN SYNTHASE | chr8 | 22425675 | 22432293 | + |
| CDS | |||||
| CsqKR_Scaf172_16.15 | |||||
| Transcript |
| CsqKR_Scaf172_16.15 |
| Protein |
| CsqKR_Scaf172_16.15 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02434 | Fringe | Fringe-like | Family | Interproscan |
| PF05679 | CHGN | Chondroitin N-acetylgalactosaminyltransferase | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003378 | Domain | Fringe-like, glycosyltransferase domain | Interproscan |
| IPR008428 | Family | Chondroitin N-acetylgalactosaminyltransferase | Interproscan |
| IPR051227 | Family | Chondroitin sulfate glycosyltransferase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12369 | CHONDROITIN SYNTHASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0008376 | Molecular Function | acetylgalactosaminyltransferase activity | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0016757 | Molecular Function | glycosyltransferase activity | Interproscan |
| GO:0030206 | Biological Process | chondroitin sulfate biosynthetic process | Interproscan |
| GO:0032580 | Cellular Component | Golgi cisterna membrane | Interproscan |
| GO:0047238 | Molecular Function | glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf172_16.15 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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