| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf159_5.16 | RAD50-INTERACTING PROTEIN 1 RINT-1 | chr15 | 2229689 | 2236794 | - |
| CDS | |||||
| CsqKR_Scaf159_5.16 | |||||
| Transcript |
| CsqKR_Scaf159_5.16 |
| Protein |
| CsqKR_Scaf159_5.16 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04437 | RINT1_TIP1 | RINT-1/TIP-1 family | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007528 | Family | RINT-1/Tip20 | Interproscan |
| IPR042042 | Homologous_superfamily | Protein transport protein Tip20, domain B | Interproscan |
| IPR042044 | Homologous_superfamily | EXOC6/PINT-1/Sec15/Tip20, C-terminal, domain 2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13520 | RAD50-INTERACTING PROTEIN 1 RINT-1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0006888 | Biological Process | endoplasmic reticulum to Golgi vesicle-mediated transport | Interproscan |
| GO:0006890 | Biological Process | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | Interproscan |
| GO:0060628 | Biological Process | regulation of ER to Golgi vesicle-mediated transport | Interproscan |
| GO:0070939 | Cellular Component | Dsl1/NZR complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf159_5.16 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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