Gene detail

Detailed information of CsqKR_Scaf144_8.12 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf144_8.12	CELL DIVISION PROTEIN KINASE	chr6	1043924	1066070	-

Gene Structure

More details in Jbrowse Sequence

CDS

CsqKR_Scaf144_8.12

ATGAACAAATACGAAATACTGGGGGTTGTAGGTGAAGGTGCCTATGGAGTGGTTTTAAAATGTCGTCATAAGGAAAATGGAGATATGGTGGCAATTAAGAAATTTAAAGACAGTGAAGAAAATGAAGATGTGAAGAGAACAACTTTAAGGGAGCTGAAAATGCTCCGAGCTCTCAAACAAGAAAATATAGTTCAGTTACGAGAAGCTTTCAGACGAAAAGGAAAACTTTATCTGGTCTTTGAATATGTGGAAAAGAACATGCTTGAACTACTGGAAGATATGCCAAATGGGGTTGAATTGGAGAAAGTGCGCAGCTATACTTTCCAGCTTTGTAAAGCAATTCAGTGGTGTCATGCTAATGAAATCATTCACAGAGATATAAAACCAGAAAATCTGTTAATAAGTAAAAATGGAGTTTTGAAATTGTGTGATTTTGGCTTTGCCCGAAATATCACAGGTGGGAATGACGGGCTGTACACTGATTACGTAGCAACTCGATGGTACAGATCACCTGAATTACTGCTTGGAGCTGCCTATGGGAAGTCTGTAGATATTTGGGCTATAGGCTGTATAATGGGAGAACTCAGCGATGGCCAGCCTCTGTTTCCAGGAGAGAGTGAGATAGATCAACTCTTTGTTATTCAGAAAGTCATTGGTCCTTTACCACCTGATCAGATGAATATGTTCTACAAAAACCCGAGATTTTCAGGACTCAAGTTCCCTGCTGTAACCACTCCTGAAACTCTGGTCAAGCGATATCAAGGAATATTAAATAGTGCTCTCATTGACTTTATGCAGATTACCCTTCAGTTAGATCCTCCAGAGAGAGCTTCTGTTGAAGACTGTTTAGAACATTCTTGTTTTGAGACAGAGAGAGTCTTAAATCGGCAGAACCCACCTGCAAGACGCATGAGTGCACACATGAAGAAACGCAAAACTGATTACAATGAACAAATCAATGGCGAATACTCCAAGGCAAACAGTCGCCCATGTTCAGTAATAGACACCAACCACAAAGAAGATTTTGAAAAAATGGACATTTGTGAAACAGGAAAAGCTGCTGATCAGCAAAATAAATACATGAAGCAGGTTAAAAATCAGACAAAAGTGAAATCTAACAACAAGGACATTGTTCTGACACAGGTGAAAAGCCAGGAACTGATTAGCAAAGATAATTCAGACACTAATGTGAAAGAGAGCAAGTCACAGGTAAAAGCTGCAACCAGTCAGTCACAGATCAGCATTGACATGGATGTGGACTTCAAAAACAAAAACATTTCAAAGTCAGACAATCGGCATCAGAGCACATTCTCAGACTTTCGTATAGCTAACAGTGTAGACATGTTTTCTAGTGTTGCTTCTAAGAAACAGACAGCTGAAGATGCAGAAGGTGAGGAAGGAATGGACTGGGCAGTGTCTGATTCGAAATATTTAAAAAAGAAGGAGTCTGTGTGTCAGTTGGATTCTAATCATAATAATGATAAGTCAAAGCTTCTAGGTGAATCATCAGCAGACACATCATCTGATAATCGAAGTAACAGAGCCAGTACTTACACCATCAATCTTGAAGCACCAGTACAAAATAATTATAATGCAAAAGGTTCAGTGACTCCTCGCATGGAAAGGAAAAAGTTTTTAGATCAGGCAACTCAGAATGAATTACACAGAATTAAGTCAAGTACTTTGGGAAAGAAGAAGGCAAGAGAAGCTGCAGCTGCTCCCATTAATAATGTCACTGAGAAACTCTGTGATGCCAGGCTACAGACTTCAGGTGATGTTGCATCCAACTCAAAATTCAAGGAATCAGTGAACTATATCCCAGCAAGAAAACCTAGGAACCAGTATATTGATTACAGTTTTTCTCAACATGACATTGCTAGAGAGGGTCGACAGCTGAGTATGCAAGCTCGATCTTACGCTAAGTACACTGGACACCAGCCTTACCACCTCCGAACTGAGTCGCCATCTGTCAGCCACCATTCCTCATGGAGAGGTATTGATAACTCAGGGTATGCAGACAGACACAATGGCATTTCTATGTACAGCATAGCTCGGAAAAAAAAGAAACAGAAATTTATGCAGTTATACTTCGGGCAAACCACTGATTTAGAAGAACGAAGTGTCTCACCAGCTACAACAGTGAGAAACCCATCACGTCTGTCTCGCGTTGACAACGACTGGGGGGACATTGATCCTCAGGACTTTTATTCACCTCGTGACATTCCCCCTACCCAGAGAGACAACTACAGAGAGCCTGCCAGGGAGAGAAGAGCTTACAAACAGAATCCAATACAGCTACAGAAGATAAATCAGGCAGCTGCTGACCGGGGTCTTCGATTACAGCCTCTACAGAAATCTCAAATGCAGCCTACTGCAAGCAACTCCCAGTACACAGATGTATATCCAGTAAAAAGCTACTCAAGAACAGACCACGAATCAAACGTTCTGACTTCTGTGTCAGGAACTGAGCTCAGGACTGGCACAAAGTCTCGTCCGACATCAGTTCTGAGAGACGACAGTGTCGACAGCAGCCTGACACTGCCAAAAAGCAATGAACTTCGACCTGTTAAAGGTTACAAAATCAACAAAACTCAGTCAGAATACCGCAGCTACCATGAATCTTACAATTAG

Transcript

CsqKR_Scaf144_8.12

CGCGACCTGATGCATTGTGGGCCTGTTGGCAAGGAAAATATTATGGCGGAGTGTGCTTTATAGATTGGAAGATTTACGATCAATAAGCTATAAAATAACGATAACAACCTGTATTTTTAAGATAAAAAGACCCAAATCATATGCCTTTATAAGAGGTCGTCGGTAAACTATTCCACTTTAAAAGGTTATAACAGACATATAATGACGGGATCTTATTTTAAGACGTATTTGCGTCGTCTGCAACACTGAACATGTAACGTGATAATATTTTGCCGTTACGTTTTGTACGAAACGGATCCAAGTTGTAAAACATTTGGGAGATATCTTATATTGATGTTGTTTTAATTAATTTTTGGATTACTAATGAAGACGGTAGTTTCCAATGACTTTTTTCAGTGGATTGTGTAGCTGGAAACAACTGCTATGTGATGAACAAATACGAAATACTGGGGGTTGTAGGTGAAGGTGCCTATGGAGTGGTTTTAAAATGTCGTCATAAGGAAAATGGAGATATGGTGGCAATTAAGAAATTTAAAGACAGTGAAGAAAATGAAGATGTGAAGAGAACAACTTTAAGGGAGCTGAAAATGCTCCGAGCTCTCAAACAAGAAAATATAGTTCAGTTACGAGAAGCTTTCAGACGAAAAGGAAAACTTTATCTGGTCTTTGAATATGTGGAAAAGAACATGCTTGAACTACTGGAAGATATGCCAAATGGGGTTGAATTGGAGAAAGTGCGCAGCTATACTTTCCAGCTTTGTAAAGCAATTCAGTGGTGTCATGCTAATGAAATCATTCACAGAGATATAAAACCAGAAAATCTGTTAATAAGTAAAAATGGAGTTTTGAAATTGTGTGATTTTGGCTTTGCCCGAAATATCACAGGTGGGAATGACGGGCTGTACACTGATTACGTAGCAACTCGATGGTACAGATCACCTGAATTACTGCTTGGAGCTGCCTATGGGAAGTCTGTAGATATTTGGGCTATAGGCTGTATAATGGGAGAACTCAGCGATGGCCAGCCTCTGTTTCCAGGAGAGAGTGAGATAGATCAACTCTTTGTTATTCAGAAAGTCATTGGTCCTTTACCACCTGATCAGATGAATATGTTCTACAAAAACCCGAGATTTTCAGGACTCAAGTTCCCTGCTGTAACCACTCCTGAAACTCTGGTCAAGCGATATCAAGGAATATTAAATAGTGCTCTCATTGACTTTATGCAGATTACCCTTCAGTTAGATCCTCCAGAGAGAGCTTCTGTTGAAGACTGTTTAGAACATTCTTGTTTTGAGACAGAGAGAGTCTTAAATCGGCAGAACCCACCTGCAAGACGCATGAGTGCACACATGAAGAAACGCAAAACTGATTACAATGAACAAATCAATGGCGAATACTCCAAGGCAAACAGTCGCCCATGTTCAGTAATAGACACCAACCACAAAGAAGATTTTGAAAAAATGGACATTTGTGAAACAGGAAAAGCTGCTGATCAGCAAAATAAATACATGAAGCAGGTTAAAAATCAGACAAAAGTGAAATCTAACAACAAGGACATTGTTCTGACACAGGTGAAAAGCCAGGAACTGATTAGCAAAGATAATTCAGACACTAATGTGAAAGAGAGCAAGTCACAGGTAAAAGCTGCAACCAGTCAGTCACAGATCAGCATTGACATGGATGTGGACTTCAAAAACAAAAACATTTCAAAGTCAGACAATCGGCATCAGAGCACATTCTCAGACTTTCGTATAGCTAACAGTGTAGACATGTTTTCTAGTGTTGCTTCTAAGAAACAGACAGCTGAAGATGCAGAAGGTGAGGAAGGAATGGACTGGGCAGTGTCTGATTCGAAATATTTAAAAAAGAAGGAGTCTGTGTGTCAGTTGGATTCTAATCATAATAATGATAAGTCAAAGCTTCTAGGTGAATCATCAGCAGACACATCATCTGATAATCGAAGTAACAGAGCCAGTACTTACACCATCAATCTTGAAGCACCAGTACAAAATAATTATAATGCAAAAGGTTCAGTGACTCCTCGCATGGAAAGGAAAAAGTTTTTAGATCAGGCAACTCAGAATGAATTACACAGAATTAAGTCAAGTACTTTGGGAAAGAAGAAGGCAAGAGAAGCTGCAGCTGCTCCCATTAATAATGTCACTGAGAAACTCTGTGATGCCAGGCTACAGACTTCAGGTGATGTTGCATCCAACTCAAAATTCAAGGAATCAGTGAACTATATCCCAGCAAGAAAACCTAGGAACCAGTATATTGATTACAGTTTTTCTCAACATGACATTGCTAGAGAGGGTCGACAGCTGAGTATGCAAGCTCGATCTTACGCTAAGTACACTGGACACCAGCCTTACCACCTCCGAACTGAGTCGCCATCTGTCAGCCACCATTCCTCATGGAGAGGTATTGATAACTCAGGGTATGCAGACAGACACAATGGCATTTCTATGTACAGCATAGCTCGGAAAAAAAAGAAACAGAAATTTATGCAGTTATACTTCGGGCAAACCACTGATTTAGAAGAACGAAGTGTCTCACCAGCTACAACAGTGAGAAACCCATCACGTCTGTCTCGCGTTGACAACGACTGGGGGGACATTGATCCTCAGGACTTTTATTCACCTCGTGACATTCCCCCTACCCAGAGAGACAACTACAGAGAGCCTGCCAGGGAGAGAAGAGCTTACAAACAGAATCCAATACAGCTACAGAAGATAAATCAGGCAGCTGCTGACCGGGGTCTTCGATTACAGCCTCTACAGAAATCTCAAATGCAGCCTACTGCAAGCAACTCCCAGTACACAGATGTATATCCAGTAAAAAGCTACTCAAGAACAGACCACGAATCAAACGTTCTGACTTCTGTGTCAGGAACTGAGCTCAGGACTGGCACAAAGTCTCGTCCGACATCAGTTCTGAGAGACGACAGTGTCGACAGCAGCCTGACACTGCCAAAAAGCAATGAACTTCGACCTGTTAAAGGTTACAAAATCAACAAAACTCAGTCAGAATACCGCAGCTACCATGAATCTTACAATTAGAAGTGTGATGGTTAAAAAACCTCTGCATGGAGTTAGGTATTGAAAAGTACAATCAGATTTTTAAAATTATTTTTCATTTTTCATTTATTTCAGAGATAAACATAATACTATGAACTGCTGTGATAAACCTCCATACTCTCTTTACAACCGATTTGTTTTTAATATTTATGAAGTAGAAATTGTTTCACCGAATATACATAGTCCAAAGAATATAATTATTATTTCATCACCTCACTATATGTGTGTTTGACACACTTCCCATGAAATATACATACATGAACTGCATTTTTTAATTAATTTTTTTAAATAAATGAAATGATGTAGATGATATTTCATCATATATTGAAAATTAATTTACTGCATTTTAAAGTTTACAGATGGCAGTAGGAGTTGCATATTTTCTTGAAGGCTGTATTTTTTTTGGCAGAGTCATACGGTTTTGCTGTTACTGGTATTGGCACATGCCATCCAATAAATCAACTTTATATTCTAAATTCAGAAACAATCAGCTTAAAGAAAAATTACTGCAGATATTGAAAGATAAAAAAATTGGCAAAATAAAATCAAAATCAAACACGAGTGGCAGCTGACTGAGACTTCATGGAAGTACACTTGTTATTTTAAAATTTTGTTATCTGCCACAGTAAATCTCTCTCATTCAATTTTCACTCAGCGTATTACCTATTTAATAACTTTATTTTTTATTTTAACATAATTTTAAAAATTTTAATTTATTATTATTTCTAAAGTGTGTTTTGATGGTTTATTTGTATAAAATTTTAGGAATATTAAATGTACTGCCGATTAGTAATTTAATTTATATATATATATTTTTTTTATATATATGTTTCGATTTTTTAGCTTGACCTAATTATAATGTTTAAAATGTATTTGCAGTATTTGTAATGTATGACATATAAGAATGGAATTCTTATTATGTGTTGCAATAAACCACATTCAGATTTTTTAATTATTATTCTAATATTATTTTAAAAAGAAAAAAGGAAATGTTTCAAGAATTAAATATAGAAAATGAAATTATGTTATAAAAACAAAAAACACAAAAAAGAAAAGGTTTAAAAAATATAAAATACTCTATCGTC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR050108	Family	Cyclin-dependent kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24056	CELL DIVISION PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0032839	Cellular Component	dendrite cytoplasm	Interproscan
GO:0045773	Biological Process	positive regulation of axon extension	Interproscan
GO:0050773	Biological Process	regulation of dendrite development	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf144_8.12 global RNA-seq network