| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf144_1.21 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | chr6 | 1709082 | 1713699 | - |
| CDS | |||||
| CsqKR_Scaf144_1.21 | |||||
| Transcript |
| CsqKR_Scaf144_1.21 |
| Protein |
| CsqKR_Scaf144_1.21 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| PF00160 | Pro_isomerase | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR002130 | Domain | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR016304 | Family | Peptidyl-prolyl cis-trans isomerase E | Interproscan |
| IPR020892 | Conserved_site | Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site | Interproscan |
| IPR029000 | Homologous_superfamily | Cyclophilin-like domain superfamily | Interproscan |
| IPR034168 | Domain | Peptidyl-prolyl cis-trans isomerase E, RNA recognition motif | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11071 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000413 | Biological Process | protein peptidyl-prolyl isomerization | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003755 | Molecular Function | peptidyl-prolyl cis-trans isomerase activity | Interproscan |
| GO:0006457 | Biological Process | protein folding | Interproscan |
| GO:0043231 | Cellular Component | intracellular membrane-bounded organelle | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf144_1.21 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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