Gene detail

Detailed information of CsqKR_Scaf140_1.48 in Chrysomallon squamiferum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
CsqKR_Scaf140_1.48	PROTEIN ARGININE N-METHYLTRANSFERASE	chr3	15969475	15977000	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

CsqKR_Scaf140_1.48

GTCATCAAGTGTTACAGTTATCTCCCTTATTTACGATGGCCGCTTCTACAGAGGCATGTGATTTGTGTGAAAAATAATGTTGATGCTGTTGACAGCGATTAGACTGATCAAAAATATTTTTAGTAGCTGCAAAGCCATGAGCACTTTTGTGTCCCAGGTTAGTCCAATAACTGGCAAAATAGACTGGGTCCTGCAAGATGAGAATTACGATTTCCACCAAGAAATTGCAAGATCTGCATATGCTGATATGCTTCATGACAAAGAGAGGAACCAGAAGTACTATGCAGCAATCAGACAGGCTGTTTCACTGCTGCATGATCAGGGAAAGATAGTAAATGTCCTTGACATTGGTACTGGCACAGGCTTGCTGTCTATGATGGCTGTCAGGGCTGGGGCTGACAAAGTCACTGCTTGTGAGGCATTTAAGCCCATGGCAGAGTGTGCAAGGGAGATAATAAAAACAAATGGCTGTGAAGCAAAGATCAACTTGATACCTAAAAGGTCGACTGAGCTCACTGTGGGACCAGGAGGTGATATGTCGGAGAGAGCTAATCTGCTTGTTACAGAAGTGTTTGATACAGAACTTATTGGGGAAGGTGCAATAGGAACATATAGACATGCTCATAGTGAACTTCTTGAGGAAGGCTGTATTGTAATACCTGGGTTCTCTACTATGTATGCTCAGCCTGTACATTCCAGTTTTATCAGCAGATGGAATCAAATTCCTCCTATCTTTGCATCTGAGAATGGAGTTATCTCCCCACCACCAGAATTCTCCAGATGTGGAGGAGCACCATCACTGCATGATTTGCAGCTTAGTCAAATACCATCAAACCTTTTCACAGTTTTGTCTGAACCATGTGAAATATTCAGATTTGACTTCAGTAAGAAAAATGCATTGGCAACACATGAACAGACAGAAATACGCATTACCTCAAAGACAGATGGACAAGTGGATGCCATTTTTATGTGGTGGGATCTGATCATGGATCCCAAAAGGGAGATTACTCTAAGCTGTGCACCTCGATGGGTCCACCCAGATGGCAAAGATCTTCCTGTAATCGCTGTTTTAATTTTCTGTTCTTACAGTGTTAATGTACATAATTCAGAGATATTAAAACATCCTCTGTGTACGTGTGGTTTACATGTGTCTGTCTGTCGAACACGCTTAGGGATGATTGGAGACCAGCAGAGAACCGAAACCTGGGGTAAAATACTAAAACATGTATTTGCATTAGAACCAAACCCATCAACAAGTCACATAGTTTCAGCATTTGTTCGTAGCAATGGTTTAGAAGACAGAGTTACAGTTTTACAGAAATCAGTTGATGATCTAACTGAACAAGATCTTAATGGACAGAAGATCAATCTAGTTATCAGTGAACCTTACTTCACATCATCACTTCTACCCTGGCATAACCTGTACTACCACTACGCTGTCAATCACATCATTCCTCTTCTATCTAACTCAGTGACAGTGCTGCCTAGGATGATGACAATCAAGGCAGTAGGGATGGAATTTGTTGACCTCTGGAAGATTCGAGCACCTGTCAAAAATTGTGAAGGTTTTGACTTGGATGTGTTTGATGATTTAATACAAAAGTCTCAACAGATCTCTGATGTTTCTGTTGAACCTCAACCTCTGTGGGAATATCCAGGAAAACCTCTCACCAAGGAAAGGGAGATAATCTGTTTTGACTTTACAGATCATGACAGCATAAAAAATGAAGATAAAACAGTAACATTATCAGTTAACAGACACGGAACCCTTAATGGTGTTGCATTATGGACAGAATATGATTTCCATGACAACATAAAAATTTCCACAGGACCAAGAAGCATGCTTCATCATGATGAGTTTGTAAAATGGGATTTCCACACAAGGCAAGGGGTTCATCTTTTACCAGAACCAAAAACTGTTGACCAAGGATTTGAAATAACCATTAAATTGACATTCAGCAAATCAACTGGAGAGTGTTCATTTACTTTTTGTTAAGTTGAATGAATA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06325	PrmA	Ribosomal protein L11 methyltransferase (PrmA)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014644	Family	Protein arginine N-methyltransferase PRMT7	Interproscan
IPR025799	Family	Protein arginine N-methyltransferase	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11006	PROTEIN ARGININE N-METHYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006479	Biological Process	protein methylation	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan
GO:0016274	Molecular Function	protein-arginine N-methyltransferase activity	Interproscan
GO:0018216	Biological Process	peptidyl-arginine methylation	Interproscan
GO:0035241	Molecular Function	protein-arginine omega-N monomethyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for CsqKR_Scaf140_1.48 global RNA-seq network