Detailed information of CsqKR_Scaf12_31.21 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf12_31.21LD02310Pchr151695928616965605+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12906RINGvRING-variant domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR011016DomainZinc finger, RING-CH-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45981LD02310PInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0002495Biological Processantigen processing and presentation of peptide antigen via MHC class IIInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005764Cellular ComponentlysosomeInterproscan
GO:0006955Biological Processimmune responseInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0031901Cellular Componentearly endosome membraneInterproscan
GO:0031902Cellular Componentlate endosome membraneInterproscan
GO:0042287Molecular FunctionMHC protein bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for CsqKR_Scaf12_31.21 global RNA-seq network
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