Detailed information of CsqKR_Scaf119_8.11 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf119_8.11HERMANSKY-PUDLAK SYNDROME 6 PROTEINchr64157709441587900-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15702HPS6Hermansky-Pudlak syndrome 6 protein N-terminal domainRepeatInterproscan
PF20468HPS6_CHermansky-Pudlak syndrome 6 protein C-terminal domainRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR017218FamilyBLOC-2 complex, Hps6 subunitInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR046822DomainBLOC-2 complex member HPS6, C-terminal domainInterproscan
IPR046823DomainBLOC-2 complex member HPS6, N-terminal domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR14696HERMANSKY-PUDLAK SYNDROME 6 PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005765Cellular Componentlysosomal membraneInterproscan
GO:0006996Biological Processorganelle organizationInterproscan
GO:0031084Cellular ComponentBLOC-2 complexInterproscan
GO:0032418Biological Processlysosome localizationInterproscan
GO:0072657Biological Processprotein localization to membraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for CsqKR_Scaf119_8.11 global RNA-seq network
TOP