| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| CsqKR_Scaf106_9.22 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN | chr13 | 19991735 | 19994282 | + |
| CDS | |||||
| CsqKR_Scaf106_9.22 | |||||
| Transcript |
| CsqKR_Scaf106_9.22 |
| Protein |
| CsqKR_Scaf106_9.22 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| PF18694 | TDP43_N | TAR DNA-binding protein 43, N-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR041105 | Domain | TAR DNA-binding protein 43, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR48033 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000790 | Cellular Component | chromatin | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005654 | Cellular Component | nucleoplasm | Interproscan |
| GO:0010468 | Biological Process | regulation of gene expression | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for CsqKR_Scaf106_9.22 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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