Detailed information of CsqKR_Scaf103_14.8 in Chrysomallon squamiferum Gene info
Gene IDAnnotationChromosomeStartEndStrand
CsqKR_Scaf103_14.8CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT Achr63041548930417802+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00027cNMP_bindingCyclic nucleotide-binding domainDomainInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan
PF16526CLZC-terminal leucine zipper domain of cyclic nucleotide-gated channels Coiled-coilInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000595DomainCyclic nucleotide-binding domainInterproscan
IPR005821DomainIon transport domainInterproscan
IPR014710Homologous_superfamilyRmlC-like jelly roll foldInterproscan
IPR018488Conserved_siteCyclic nucleotide-binding, conserved siteInterproscan
IPR018490Homologous_superfamilyCyclic nucleotide-binding domain superfamilyInterproscan
IPR032406DomainCyclic nucleotide-gated channel, C-terminal leucine zipper domainInterproscan
IPR050866FamilyCyclic Nucleotide-Gated Cation ChannelInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45638CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT AInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005222Molecular Functionintracellularly cAMP-activated cation channel activityInterproscan
GO:0005223Molecular Functionintracellularly cGMP-activated cation channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0017071Cellular Componentintracellular cyclic nucleotide activated cation channel complexInterproscan
GO:0030553Molecular FunctioncGMP bindingInterproscan
GO:0044877Molecular Functionprotein-containing complex bindingInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0098655Biological Processmonoatomic cation transmembrane transportInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for CsqKR_Scaf103_14.8 global RNA-seq network
TOP