Detailed information of Csp24G006720.1 in Chaunax sp. Gene info
Gene IDAnnotationChromosomeStartEndStrand
Csp24G006720.1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATEDChr241831968118412526+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF01826TILTrypsin Inhibitor like cysteine rich domainDomainInterproscan
PF19028TSP1_spondinSpondin-like TSP1 domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001007DomainVWFC domainInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR002919DomainTrypsin Inhibitor-like, cysteine rich domainInterproscan
IPR006207DomainCystine knot, C-terminalInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR014853DomainVWF/SSPO/Zonadhesin-like, cysteine-rich domainInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR036084Homologous_superfamilySerine protease inhibitor-like superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR044004DomainSpondin-like TSP1 domainInterproscan
IPR050780FamilyMucin/von Willebrand/Thrombospondin superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11339EXTRACELLULAR MATRIX GLYCOPROTEIN RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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