Detailed information of Csp18G001530.1 in Chaunax sp. Gene info
Gene IDAnnotationChromosomeStartEndStrand
Csp18G001530.1MHC CLASS I-RELATEDChr1854468685466149+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00013KH_1KH domainDomainInterproscan
PF00129MHC_IClass I Histocompatibility antigen, domains alpha 1 and 2DomainInterproscan
PF00664ABC_membraneABC transporter transmembrane regionFamilyInterproscan
PF07654C1-setImmunoglobulin C1-set domainDomainInterproscan
PF13358DDE_3DDE superfamily endonucleaseDomainInterproscan
PF13359DDE_Tnp_4DDE superfamily endonucleaseDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003597DomainImmunoglobulin C1-setInterproscan
IPR004087DomainK Homology domainInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR011161DomainMHC class I-like antigen recognition-likeInterproscan
IPR011162Homologous_superfamilyMHC classes I/II-like antigen recognition proteinInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR027806DomainHarbinger transposase-derived nuclease domainInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR036640Homologous_superfamilyABC transporter type 1, transmembrane domain superfamilyInterproscan
IPR037055Homologous_superfamilyMHC class I-like antigen recognition-like superfamilyInterproscan
IPR038717DomainTc1-like transposase, DDE domainInterproscan
IPR050208FamilyAntigen-presenting and immune regulatory MHC class I-relatedInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR16675MHC CLASS I-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0006955Biological Processimmune responseInterproscan
GO:0009897Cellular Componentexternal side of plasma membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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