Gene detail

Detailed information of Csp17G003990.1 in Chaunax sp. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Csp17G003990.1	NEUROPEPTIDE Y RECEPTOR	Chr17	12595504	12611329	+

Gene Structure

More details in Jbrowse Sequence

CDS

Csp17G003990.1

ATGGCAGCGATTGGAAACCGCGGAACAGTGACTGAGGCGGCTGGTTTTAACCCAGAGGCAGATGTTCAGAAGCTTCGAGAAGCCATGAAGGGAGCTGGCACCAACGAGGCAGCTATCATAGAGGTGTTACCACACCGTACTATTGCCCAGAGGCAGCGTATCAAAGAAGCCTACAAACTAGCTGTGGGGAAGGACCTGGCTGATGATCTCTCCTCAGAGCTGAGTGGGAACTTCAGGAGTGTCGTTCTCGGTCTGCTGATGCTGGCTCCTGTGTACGATGCCTATGAGCTGAAGAATGCAATGCAGGGGGCTGGAACAGAGGAGGCTTGCCTCATCGATGTTCTCGCCTCAAGGACAAATGCTGAAATAAACACCATAAATGCTTTCTACAAGAAAAAGCATGAGAAGTCCTTGGAGGATGCTGTGTGTGGGGACACTTCTGGAATGTTTCAGAGGGTTTTGGTCTCTTTACTCACGGCTGGGCGGGATGAAGGTGTCAATGTGAACGAGGCCCAGGCTGTTCAAGATGCCAAGGCAAGAGTTCAGGAAATCTTTGAGGCTGGCGAGGCTCGGTGGGGCACAGATGAGGTTAAATTCCTCACAGTGCTTTGTGTGAGGAACCAAAACCATCTTCTGCGAGTGTTTGAGGAGTATCAGAAGATTTCTGGACGAGACATCGAGGAGAGCATTAAGAGGGAGATGTCTGGCTGCCTGGAGGACGTCTTTCTGGCCATAGTGAAATGTCTCAGGAACAAGCCAGCGTTCTTTGCAGAGCGATTATACAAATCAATGAAGGGGCTGGGCACTACGGATAGTGTCCTCATCAGAGTAATGGTTGCCAGAGCGGAGATTGACATGTTGGACATTAAGGCGCAGTTCCTGAAGATGTATGGCAAGACACTCTACTCCTTCATCAAGAAATCTTTCCTAAAAACCTTTGGTTACTGTGTTTTGGACAGCACTGGCAGACTGAGCTTTGCTGTCATGGAGGGTAATCACAGTGCCTTGGCTGGCAGCACACAGACAGATGGACATGTTTATGAGGTTGTGGTACAGAATAACTCCACCAATCACAGCTCCCAGTTTGCAGATGTGGCTCTGCTGCAGACCTTCAAGCCCCTCATCATCCCCTGTTATGTGCTTGTTGTGATGGTGGGCGTCTTTGGGAATTACCTGCTCCTGTATGTCATCTGCCGAACCCGCAAGATGCACAATGTCACCAACTTCTTCATCGGAAACCTGGCCTTCTCCGACATGCTCATGTGCGTGACCTGCGTCCCCTTTACCCTCGCCTACGCCTTCAACCCACGGGGTTGGGTTTTTGGCCGCTCCATGTGCTATCTGGTGTTTCTCATCCAACCAGTCACAGTCTATGTTTCAGTCTTCACACTGACTGCTATTGCTGTGGACAGATATTATGCAACAGTTCATCCCTTGAAGAAGCGCACCTCTGTGGCTACCTGTGTCTCCGTCCTCACTGGTATCTGGCTGCTGTCCTGTGGGCTTGTCGCTCCAGCTGTCACACACACCTACCATGTAGAGTTCAAAGATGAAGGCTTCACCATCTGTGAGGAATTCTGGTTGGGCCAAGAGAAAGAAAGACGTGCTTACGCATACAGCACCCTGCTGATCACCTACGTCCTACCGTTGTCAGCTGTCTTTGTGTCTTATCTCTGTATTACTGTCAAACTGAGAAATTGTGTTGCACCTGGAAACAGGACACAAGACCGGGCAGGTGCTCAGCAAGCTCGCAAGAGGAAGATCATTCGCTTGGTGGCACTCTTGGTGTCTGCCTTTGCAGTCTGTTGGCTTCCTATTCACGTCTTCAATGTGCTGCGAGACATAGACATTCACCTGATTAACAAGCGCTACTTTTTGCTCATCCAACTGCTGTGTCACTTGTGTGCCATGAGCTCATCTTGTTGTAACCCCTTCCTCTATGCATGGCTGCACGACCGCTTCCGCACCGAGTTACGAAAGATGTTCAAGTGTCATCAACGCATTGGAGTGCCTGCCAATCACTGTGCTGCCAGTGTGGTCTTGTAA

Transcript

Csp17G003990.1

ATGGCAGCGATTGGAAACCGCGGAACAGTGACTGAGGCGGCTGGTTTTAACCCAGAGGCAGATGTTCAGAAGCTTCGAGAAGCCATGAAGGGAGCTGGCACCAACGAGGCAGCTATCATAGAGGTGTTACCACACCGTACTATTGCCCAGAGGCAGCGTATCAAAGAAGCCTACAAACTAGCTGTGGGGAAGGACCTGGCTGATGATCTCTCCTCAGAGCTGAGTGGGAACTTCAGGAGTGTCGTTCTCGGTCTGCTGATGCTGGCTCCTGTGTACGATGCCTATGAGCTGAAGAATGCAATGCAGGGGGCTGGAACAGAGGAGGCTTGCCTCATCGATGTTCTCGCCTCAAGGACAAATGCTGAAATAAACACCATAAATGCTTTCTACAAGAAAAAGCATGAGAAGTCCTTGGAGGATGCTGTGTGTGGGGACACTTCTGGAATGTTTCAGAGGGTTTTGGTCTCTTTACTCACGGCTGGGCGGGATGAAGGTGTCAATGTGAACGAGGCCCAGGCTGTTCAAGATGCCAAGGCAAGAGTTCAGGAAATCTTTGAGGCTGGCGAGGCTCGGTGGGGCACAGATGAGGTTAAATTCCTCACAGTGCTTTGTGTGAGGAACCAAAACCATCTTCTGCGAGTGTTTGAGGAGTATCAGAAGATTTCTGGACGAGACATCGAGGAGAGCATTAAGAGGGAGATGTCTGGCTGCCTGGAGGACGTCTTTCTGGCCATAgTGAAATGTCTCAGGAACAAGCCAGCGTTCTTTGCAGAGCGATTATACAAATCAATGAAGGGGCTGGGCACTACGGATAGTGTCCTCATCAGAGTAATGGTTGCCAGAGCGGAGATTGACATGTTGGACATTAAGGCGCAGTTCCTGAAGATGTATGGCAAGACACTCTACTCCTTCATCAAGAAATCTTTCCTAAAAACCTTTGGTTACTGTGTTTTGGACAGCACTGGCAGACTGAGCTTTGCTGTCATGGAGGGTAATCACAGTGCCTTGGCTGGCAgcacacagacagatggacatgTTTATGAGGTTGTGGTACAGAATAACTCCACCAATCACAGCTCCCAGTTTGCAGATGTGGCTCTGCTGCAGACCTTCAAGCCCCTCATCATCCCCTGTTATGTGCTTGTTGTGATGGTGGGCGTCTTTGGGAATTACCTGCTCCTGTATGTCATCTGCCGAACCCGCAAGATGCACAATGTCACCAACTTCTTCATCGGAAACCTGGCCTTCTCCGACATGCTCATGTGCGTGACCTGCGTCCCCTTTACCCTCGCCTACGCCTTCAACCCACGGGGTTGGGTTTTTGGCCGCTCCATGTGCTATCTGGTGTTTCTCATCCAACCAGTCACAGTCTATGTTTCAGTCTTCACACTGACTGCTATTGCTGTGGACAGATATTATGCAACAGTTCATCCCTTGAAGAAGCGCACCTCTGTGGCTACCTGTGTCTCCGTCCTCACTGGTATCTGGCTGCTGTCCTGTGGGCTTGTCGCtccagctgtcacacacacctACCATGTAGAGTTCAAAGATGAAGGcttcaccatctgtgaggaattCTGGTTGGGccaagagaaagaaagacgtGCTTACGCATACAGCACCCTGCTGATCACCTACGTCCTACCGTTGTCAGCTGTCTTTGTGTCTTATCTCTGTATTACTGTCAAACTGAGAAATTGTGTTGCACCTGGAAACAGGACACAAGACCGGGCAGGTGCTCAGCAAGCTCGCAAGAGGAAGATCATTCGCTTGGTGGCACTCTTGGTGTCTGCCTTTGCAGTCTGTTGGCTTCCTATTCACGTCTTCAATGTGCTGCGAGACATAGACATTCACCTGATTAACAAGCGCTACTTTTTGCTCATCCAACTGCTGTGTCACTTGTGTGCCATGAGCTCATCTTGTTGTAACCCCTTCCTCTATGCATGGCTGCACGACCGCTTCCGCACCGAGTTACGAAAGATGTTCAAGTGTCATCAACGCATTGGAGTGCCTGCCAATCACTGTGCTGCCAGTGTGGTCTTGTAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF00191	Annexin	Annexin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR001464	Family	Annexin	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR018252	Conserved_site	Annexin repeat, conserved site	Interproscan
IPR018502	Repeat	Annexin repeat	Interproscan
IPR037104	Homologous_superfamily	Annexin superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24235	NEUROPEPTIDE Y RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005544	Molecular Function	calcium-dependent phospholipid binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0008188	Molecular Function	neuropeptide receptor activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0042923	Molecular Function	neuropeptide binding	Interproscan
GO:0043005	Cellular Component	neuron projection	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-