Gene detail

Detailed information of Csp11G002500.1 in Chaunax sp. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Csp11G002500.1	CDK2-ASSOCIATED AND CULLIN DOMAIN-CONTAINING PROTEIN 1	Chr11	5733195	5737483	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Csp11G002500.1

CTACTACAAAAGACGCCTGACAATTTCCTTCTCTATCCGTAATTATCGAAAATATTTATGTAGTGACGCTACGTTCCGGCATCAAGTTGTGAAAATGGAGGCCATGGAAGATGATAGTTTGAAGATAAAAGACGACCATAACCACAATTATTGTGCGAGCAGTAGCAGCAGTAAAGTCCGTACTTATGTGAGTAGCCAGCTGTCGGATGCAGCGTCGGTCCCGCAGCCCGTCTGTCTACCGGTCTCTCGAGGAGAACCGGGTACCCGACAGGGGAAAGTGTGGTCCGGCTCCTCTGGAGGGTCAAAGTTCATGGATTCGGATTCAGGGAGTGAGAGCAGCGAAGTCAGTGAGACCGATTGTACCGCTCCGCCAGCCAGTGTCGAGGGAAAATTCACTCTCGATTCGACGTCCAAGTTCCTTCTGAACGCAATGGCTGTAGAAGACTACCGGAAAAACCACTGGCCAAACCTGGAGAAGGCGATTGACCGTCTCCTGATTCAGAATCCCACAGACCACATCTCTGTCTCTTATGCACAGATACACAGCTACGtctataagtgtgtgtgtcagcagcaCTCTGAGCTGCTCTACAGTGATTTGACATCAAAAATAACAAGTCATCTGCAACAGATTTCCATCCGTCTACAAGCCAGCCCACCTGAGAACATCATTGAACACTTCAACATCGCGCTGACACAATACACATCATCTCTTCAGTGTATTGTTCCTGTGTTTATGTACTTGaaCAAGTTCTACATCGAGTCCAAATTGAACAGAGACCTAAGAGAGGATCTGATGAAGGTGTTTGCTGATCATGTCGCTGAAAagcatgtgaacacactgatgCCTCTTCTTATCAAAGCTCATTCCATGCCTTTTCAAGTGCAACCATCTACAATGGCCAGTGTGGTCAAAGGCCTCTACAGCCTCCGACCAGAGTGGGCCCAGTTAGCCCCAGCTCTCTTTTCTGGATTTATTCCCCAAATCAACCCTCCTGCTCTGGAGTCTCTGCTGCCTGACTACGCTGCTCACGACCAGAAGTTGCAGATGGAGCTCTCCATGAACGGGTTTCCACGGTCAGATTTCTCACATTGTCACAGTCTGAGTACAAATACCTTTTTTTGCATTACTCTCAATTtaagatgtgtttttgttttctagaGGTGACCAGTCTCGCAAACGGGCAAGCGATGACTCCTGATAACGGAGCCGCCGTCTCCAGACCTGTCGCAGAACCGTTCATATTTATCACAAGTTGGCTCACTGGGCTAGGTACAATGTTGACAGCGGGTCAGTTTCATCTCGCTCAACTCAAGGTCACAAAACACCGTGAAATAAAGAGAACCTGACGTTGGGCATAAGCTTAATCTCACTGCACTAGATTAAAAAAAGCACACAGACTTCCGTTATGGTGCTTTCCTCTGTGATCATGATGCATCCAGCTTCAGTATTTTTGGGATACAGCTGTGTGCGCTGAGATGGGTTTCTTCACGTTCTCCTCCTCTGAAGAGTGCCTTCATGGTGTCTGTTCTGATTGGATATCCTAACGGCAGATAGGCTGATGATGGGTGTTTCTTTTCTAaccttttaaaacaaaagtgtcTCTTTTTATAGACTGGCCTAACAAGACTTTCTATTGCTGCTAATGATACTGTCCATGTAATACTACAAATCCCTCAGCTTCTCCCACTGTGTCCCTCACCAAGTTGCTTCACTCCACACACAAGTGTACAAAGAAATGAGAACCGGAGAAACCAGAACTCTTAATGTTGCCTTTATTGTGTTGGTAAACCTGATTGTATTTTTCCAATACGCCAAAGAGGATAAGTAgtacttgtctttttttttctttctttttttacggTTTAAGAATAGTCTGGGTTCTAATCCAGACTTGGGGCCtccctgtgtggagtttgcatgttctcctcatgtctgtttagcttcccTCTGATCACTCCGGTTccttcccacagtccaaaaacatgcatttatgTGAATTGATGATTAAATTTCCCCTAGGTGTAAATGAGCATGTCCAGGGTTTACCCTGCTTCTCGCCTAGTGTCTGCTGGAATAAGCTGAATaagctccagcccctccgcaaCCCTGAAAATGAATGCATACATCATGCATTTGATTACAGTAGATGTTGATTATATTGTATGTATGCTGTCTGAGTCACTgagccatttcttttttttatactaaCAAGTTTTTGAGCTTATTTTGTTAtacttttttctcctcttctatACGTCACCTCTGTTTTAGCCTTGCATGTAGGATTAGCAGGGATTGCTTTATAGGACGTTACACTGTTTGCCAGAAATCTTAGAGAGCCACACAATGGTTTTGGACATTTTTCTAATAACATTTTTCTAATACAGCTTCAGTTTGTTTGACAACTTACCTAATCATACCTTAACTGTACATGTATACAACCTAATGCTTTTTGGATTTTTATGAAACAAATATGCAAGTATCATTAGGCATGAGTCTGTTAACATGTCTGGTCTGTCATGATGTAAATGTCTTTTGTCTGTGGATAGTGGTACACTTGCTTTTGTCACAGCTGCGTTTGCTAAATGATCCATTTGAATAAACATCTTTGATACAAGGTCTTACACTGTTTTAAGTGTAAATAGATGCTCTCTGTTGCTTTTCGTTTCAATCTGTTGGTCTTGGAAATGGTTCTCATTGTCTTTTTGAATA

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|Cullin

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00888	Cullin	Cullin family	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001373	Domain	Cullin, N-terminal	Interproscan
IPR016159	Homologous_superfamily	Cullin repeat-like-containing domain superfamily	Interproscan
IPR042652	Family	CDK2-associated and cullin domain-containing protein 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46636	CDK2-ASSOCIATED AND CULLIN DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000082	Biological Process	G1/S transition of mitotic cell cycle	Interproscan
GO:0006511	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0019901	Molecular Function	protein kinase binding	Interproscan
GO:0031625	Molecular Function	ubiquitin protein ligase binding	Interproscan
GO:0045860	Biological Process	positive regulation of protein kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-