Detailed information of Csp09G007540.1 in Chaunax sp. Gene info
Gene IDAnnotationChromosomeStartEndStrand
Csp09G007540.1POLYCYSTIN-1Chr091924676219306223-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF00801PKDPKD domainDomainInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF02010REJREJ domainFamilyInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF18911PKD_4PKD domainDomainInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000203Conserved_siteGPS motifInterproscan
IPR000434FamilyPolycystic kidney disease type 1 proteinInterproscan
IPR000483DomainCysteine-rich flanking region, C-terminalInterproscan
IPR000601DomainPKD domainInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR006228DomainPolycystin cation channelInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR014010DomainREJ domainInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR022409DomainPKD/Chitinase domainInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR046791DomainPolycystin domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46730POLYCYSTIN-1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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