Gene detail

Detailed information of Csp05G007010.1 in Chaunax sp. Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Csp05G007010.1	SYNAPTOSOMAL ASSOCIATED PROTEIN	Chr05	15869016	15873726	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Csp05G007010.1

AGCACTTTTGGGACAATACGCGCCAACGTCACCAAACGTAGCCGGAAGTGTTCGTTTGCTAATGTCAGCTGATACAGCAACAACGTCCACATCTCTGACGGTCAAAGATGGCCTACCCTAAATCCCACAACCCATttgcagatgatgatgatgaggaagatTTTAAGCCTAAAAGTAGGGGGTTtgatgatgaccctgatgacaGCGGAATGAGTGATGCAGAGAGGAGACAGCGGTACCttcaacaggaagtgatgcATACAGCTCAGTCTGCTGTGGACAGCAGTTACCGTTCCCTTGGCCTCATTTATGAATCAGAAAAGATGGGGGTGGAAACTGCTGAGGAGCTGATGCGACAGGGTGAGGTTCTGAAGAGGACAGACAAGATGTTGGACAACATGGATCAGGACCTGAAGACAAGCCAGAGGCATATTACCAGTATCAAGAGTGTGTGGGGAGGCCTTATCAATTACTTCAAGGGCAAGCCAGAGACAAAGCCACCACCTGAGCAGTCAAAAGCTTACCAGGCCAGCGACAGATTGCAGAGTTCCCTCTCCAGCAGCAGAGAACATGAAGATAAATACCAAGCCAGCCACCCCAACCTAAGAAAGTTGGATGCAGGAGGTTTTGGAGCTTCCACATCACTAGATGATAGCTCGTTTGGACAGAATGGATACCCGCAAAACAGACACCTCAGGGATGCTCATCAGACCCTCGACAAAAATTTAGACGAGATGTGTGATGGCCTGAGCAGACTGAAGAACATTGGACTTGGTCTCCAGTCTGAGATTGACAACCAAGACGACTCCATTGATTCTTTGCTGAATAGAGTGGACAAGATGGATGTAAAGATCCAAAACACAAACCAACAGATTAAAAacctgaaataaaacaaacacttggACACACCTGCAGAGACAAAAGATGGCAACATGTCATCCACTCACTTGACTTTCCATCTTGGCCTCTGTAACATAAACTAAGCTCTTTGATATTGTTTAGTGTTTTATGGATGGTTTTATGGAATGTGTTACTCAAGCAGATAAGCAAAGTGAATCTATTTGATCCATATTTTCATCTCAAATGACTTAACGGTCATCTGCCATTGAATTGTGTCAGGTTTGCCCATGATTTCAAGTTTGCATAGAAATTCTTCCTGCCACTCCACTGAATCTCGTATTTGTGTGCTTCAAAGAGAAGACTCAAATCTGACTTCTAATACTCAAATTTATTATAAGTAAGACATTGTTTATGTCAAGATCGAAGTTGCTAGTTCTCCCCAATCAAGCTTTGTTGTACTTCTGTCTGAATGTAGTCTGTTGAATTTGAGTATGGATGACCAAATTATCAGTTTGATCAGCTTGTCTTAACTGCCAAACATGTATAAATGGCTACTAATTTAGTTTAGTGACTGGTTAGCTCATAATTCAGGCTAAACAGATAAATGGTTTGACAAATTATTAGTAATTAAATACAAAGGAATACTATCTGTCTGAAACTAATCTTATGTGTGTATGATTAATATGTCATTGCTAAAATATTCCTGGACCTACCTTCACATATGCGTCAAAACACTTTGGACGTCTGCTCACTTTTGCCTTATATGTCATTTCTATCCTCATCAGACAAGCTTTTGATATTGTGCCGTTATTCTGTTTCCACTGTGAAGCTTCCTTTCACGTATGTTCATGTGCTTCAGTGCACTCCCTAGCCTTATATAAATTGTTTCTATTGATAAATATTGTATTGAATGCTGCAAAATGTGATATAATAAATTGTTGTACAACAATGTGAATTTGCTAGCTGTGAATataaaaactgtgtgtgtgtgtatatatgtatatatatattatatacatatagttTTTATATTCAATCAGAACCACATAaccaataaacacatttttaaggggagtctcagttttataaatgttctgttaaagtaaagCAGCAAGTCAAAAGCACCACAAGGTGACGCCACATTTCTACTGTAGGATGGAATTTTCATGCTTGTGCAGAATAACACCACTGTTAGTGATTCATTAGATTGTGTATGTT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12352	V-SNARE_C	Snare region anchored in the vesicle membrane C-terminus	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000727	Domain	Target SNARE coiled-coil homology domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19305	SYNAPTOSOMAL ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005484	Molecular Function	SNAP receptor activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006887	Biological Process	exocytosis	Interproscan
GO:0006906	Biological Process	vesicle fusion	Interproscan
GO:0016082	Biological Process	synaptic vesicle priming	Interproscan
GO:0019905	Molecular Function	syntaxin binding	Interproscan
GO:0031201	Cellular Component	SNARE complex	Interproscan
GO:0031629	Biological Process	synaptic vesicle fusion to presynaptic active zone membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-