Gene detail

Detailed information of Conbi11518 in Conchocele bisecta Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Conbi11518	ZINC FINGER HOMEOBOX PROTEIN	LG1	81350785	81422361	+

Gene Structure

More details in Jbrowse Sequence

CDS

Conbi11518

ATGGACCACACATGTGCTGCCAATAAAGGTGTCGAGAAGGGGCGTATTAACGTGAGCAAGTTACCAGAAAAGAATAGCAAGGATCTAAGTGATGTTGAAAGCTTCGATGGGAAGATTGTGTACAATCCCGATGGCTCGGCCTATATAATAGAAGGTGACTCGGACAGTGACCTTGACTCGATTATTGATCTTCCACAGAAGGAGGGGGTAATCATTGATAGACGAGGAATGACTGGTGAAACTTCCAAACGGCTAATACCACCCATTAACAACGCGTTCTTTGTTCCAAGAAATCCAAGTTTGCTCGTGAACAGCATGTATGTGATACCGCAAAAACAGCAAACACCCATAATGCACAGTTATCGGGTGTATGATCTGAGATCAGGAAAACCAAACTCTCAAACCTCAGGTGAATCTGATGCTAAGAATTCCACATTGTCGTCGTCACATTCAGATCTGCCATCTACCTCAGTATCGTCATCGTTAGATCTTTCATCATCGCATGTTACAACAGTCCCGACAAAACCGATACTCATGTGCTTTATATGTAAACTCTCATTTGGTTTTGCTAAGTCTTTCATGTCTCATGCAAACACTGAGCACTCTATGATACTTACAGCTGAAGAAAATGAAGTCATGTCACAGAAATTGTCATCGGCTATTATACAAGGAATCGGGAAAGATAAGGATCCGCTGATGTCTTTCCTAGAACCAATCAAGTCATCTGTTAACTCGTCAGTAAAACTACCAAAACTACAAATTTCGAAAGATATAGAAAGTGAAAGCTCAACTTCAGCATCAAAGCCGTTCTTGCCGCCACTGCCATCCCCTCTCGGGCACAAACCAGGATTTTATGGTGTGTGTGAGGAACACCCGAATGGACGAGTACAAGGCGTGGAATGCCCCAACTGTGACATGGTCCTTGGGTCGTCACAGTCCCTTGGTGGTCACATGACTATGATGCATTCTCGCAACTCGTGCAAAACGTTGAAGTGTCCAAAGTGTAACTGGCATTATAAATACCAGGAAACGCTAGAAATCCATATGAAAGAGAAACACCCAGACAGTGACCAAAAGTGTATGTATTGTCTAACAAATCAATCTCACCCTCGCTTAGCACGAGGCGAAAGCTACTCATGCGGTTACAAGCCGTATCGCTGTGAAGTTTGCAACTATTCCACAACTACCAAAGGAAACCTCAGTATTCATATGCAGTCTGACAAACACTTGAACAATGTGCAGGAACTTGCCAATGGGGGTGGGGAGATGAAGATGCCACAGCAACTTCCACCACCACCACCGCCACAACAGCCCCCACCCACCCCGCCCATCACCCAATCAAAAACGCCACCTCATCAACAGCTGAATCAACAACAACAACAACAGTCCCTGAGCGACAGCCTACAGAAAAACAAGCAGAATAAACCTAAGCCGACATGGAGGTGTGACGTGTGTAACTATGAGACGAACGTCGCACGCAATCTGCGCATCCACATGACAAGCGAGAAGCACACGCACAATATGATGGTGCTGCAGCAGAACATGAAGCACATGCAGCGCGATATGCAGCTCCACCAGCTGAACCAGTTCGCCATGCTGCAGCAGGACCCATCCTTCCTCGGGCTTGCAGGCCCCATCCCCGGCGGTGTCACCTTCCCGTACGACGGCTCCCTCATCATGGGCGGCATCCCGCAGGGCTTTGGTGAGGCGCCAATGGACCTGACCAAGGAAAACGGCATCGGACCGGGACCAATGGGCTCTGACACCCTCCCAGATGTGTCACGGCTGTACCAGTGCTGCGTATGTAACATCTACGGAACGGACTCGCTCGAATCCATGCATCAGCACTTGCAACTCGATCGAACGAAACAACACGAACACGATAACATCGTTATCTCAAATGGAACGTACATGTGCAACCTGTGTCAGTACAAGACGAACCTGAAAGCGAACTTCCAGCTTCATTGCAAAACCGACAAACATCTACAGAGGCTGCAGCTGCTGAACCACATAAAGGAAGGAGGCGACGATAACGAATGGCGGCTGAAGTACCTGAACGTCAGCAATCCGGTGCAGGTCCGCTGTAACGCATGCGACTATTACACAAACAGTATACACAAGCTGCAGATCCACACGGGGAACCCGCGCCACGAGGCGAGCGGCCAAATATTCTGCCATCTCCAATTGCAAGTGGCGAAGTTCCCTGCGGGCGCTGATAAGTACTACCAGTGTTCGCTGTGCAAGTTCAACGCGCGTTCGAAGCTGGGGCTGATGCAGCACGTGCACTCGATGCAGCATCTACACAGCGAGAGTGTGAAGCAGCTCGAGATGAAGGAGACGGGGCAGTTGGAGATTGACATCGGTGACATCTTTGTCGTGAAGGAGATCCACGACACGGACTCTGTCAAGGTTAAACCCCATCACGATAAAATGAATAAAATGAAGATCGTTTTGCTTACACACCATAATGCACATCCCTGTCACCAAGAATCTATATGCCTGCCCTCTTCATCAACTATTTATACTTTTATGCGCACGTTTTTCGGTTCAGTTTCTAAATTTTCGTTAATGTGTAGTTTAACCAAGACAATAATTAGGATACACCGTACGGCTAGCTGCCCCCTGTGCCAGGAGCCGTTGCCCGACCGGAGCAGCATCGAGGCCCACCTGACGGCCGTCCACAGCGTCACCAGCGAGGGCCTCCACAAACTGCTGCTGCTCGTAGACGAGCCGCGGCTCGCGATGCCGCCCACCACGATGAAGGAGCTACTTCCTGGCCCCCAGGCCACGCTCGCCGAGATCACCATTGACTTGGCCAGCCTGTCGGACAAAGATATTGAAGAGCAGTTTCGCTGTCAGACGTGTTCAAAAGCCTTCACGAATATTGACCAACTCTACGCACACCAGAACGAGCTGGGACATCTGGAGCTGAAACAGACACCACGTGGACCTGGCTACCTATGTTGGAAGAAAGGATGCAACCAGTACTTCAAAACTGCCACGGCACTTCAGATGCACTTCCGGGAAATACATGCAAAACGACCAAACTTGACTTCTATGGACAAATCATTGTATAAGTACCAGTGTTCGCAGTGTACCCTCGCATTCAGACTGCCGGAGAAGCTACAAATTCACACACAGATTCACTTGATTAAGGCGGCATTGGCCTGTTCTTTCTGTAGCAAATCGTTTCAGTCAATTGCGAACTTAAAGATACATGTTCAAGTGACGCATGACTTGAGTGAGGAAGATTTGGAACAATACAATGACAAAGTTAGTGCTAATGCTATGGTTCTCGCCACCTTGATTGGTAATTCTGGTTTAAGTAAAGTTTTCTCTTTTTCTGAGAATGGGTCTGGTTCCAATGACAAGGATGGGATGGATATGGAGGTAGATGATGTGGACAACATTCCCGATTCTGAAGACTCTTCGTCAAAGGGTAGTTCATCTTCGTCAACACCCATTTCCATGGAAAACGGTATTGATAAGAACTGTAACTCCTTAGATGGACTTGATAAGGACAGTGTTAATGATCTTGATTCAAAAGAACAACAATTCTTTGAGGATTATGTTAATAGTCAAGCAATGGCCGAAAATTCATACGAAGATCCTGCACGGAAGTTTAAATGTCACAGGTGTCGCGTTGCATTTACTAGACAGAATTATCTCACTGCTCACAATAAGACAATGATGCATCGAAAGGGTGATAGACTTAGTTACCCAATGGAGAAGTATCTCGACCCAAACAGACCATACAAATGTGATGTATGTAAAGAATCATTTACACAGAAAAACATTTTACTGGTTCATTATAACTCTGTATCTCATCTCCATAAAATGAAGCAGGTGTCACAATCCAGCACCAGTCCTACACCGTCATCGAATGTGTCATTCTCATCCACGACACATACAAGTATTGCTAACTCCACACCATCAACTGCCACCATGCCATCCCTGGAAAAGGTCAATAGTAAGAGGCGAGACTACTCTCCAGAAGATGACACCTTACGCCCGTATAAATGTAACATCTGTAAGGTTGCGTACAGCCAGGGCTCGACACTCGACATTCACATCCGATCCGTGGCACATCAGACGAAGGCTTCCAAACTGCACGAGCTTGCCATGACTGGCGAAGTTGATCTGACTCGCCCACTTATAGAAGAACCTGTTGATCCTCAGAAGACCGCTCAAGCTCAACAGCAGAAACTGATTGCAGAAATCATCAGTAAGCAGACATCGGAAGCCATGTCGCAGCAATCAATGTTGTTCCAGGGTCTGCCAGGGTTTCCTGGCCTCCCATCAGTTACTGGCGTACCGCTGCTCCCAGGGGTACCGCCCCTGTTACCGATGTCACTTCCAATGTCACTTCCAATGTCAATACCCAGTAATGTGTTCTCCTCAGCAGCCAATCTAGTAGGCAGCTCTAGTCACACCGCATCTAGTTCAACAGCATCTGCAAACTCAACAGTTTCCAGTAAACCGCCTACAGAGTCGTCATCCTTGTCAGCCAACAAGTCCCTGGAGAAGATATCCCAGCAGCTTAAGGTATCACAGTCACACAACACTGGTCCAGTATTGGAACCATCAACACCTCAAAGTCAGATTAACCTCTCAGGAAATATCCAAGTGTGTAGTCACTGCTGCGCTGTGTTTGCCAGTACCGAAGCATTTGCACAACATCAGGCCTACTGCTCAGGGGGCTTTGTTAGCCCAACATCTACAGCATTTGGTGCTGTGTCACAGTCTGGTTCCCAAACACCAGAAGTTCCAAGACCGAGAGAATTCAGTGGACGAGTGAAGGCCCAGGTACACAGGAACTTGTTGCAAAACTATGGCTTTGAGTGTGTCATGCAATTCAATGAATTTGACCAACCATGTCGTTTACATGAGGCTGATGAGATATCAAACCCAGGACATTGTGATAATCCAGGAAGTCCAAAGAATCCAGGAAATCCAGTTGATGAGCTCAAAGAGGATCCTGAAAATCCTGGTTCTGATTCCGAGAAAATCGCTGCCACCAAAGAAGTGAAAGAGAAGACACAGCTAGACCTTCCAGAGATGAACAAGTGTGCATGTGCAGTGTGTGGAAAGGCCTTTTCCAGCGTCTGGGTCCTGAAATCGCATGAAGAGGAAGTTCACCAAGACATTGTACCCACTGATGTCGTCGAAGATATTGGTGATCAATTTAAGGCAGACTTTGAAAAGAGAATACCAAAACTGGAACTAGAATTTCCTCTACCAAGTGCAGCAGTACCAGTTGTTTTAGCAGCAACTGTAACACCAACCAAAGAAGTAGCAGAAACTATGGTGAAGCAAGAAATGCCCCCACCACCACCGCCACCCCCTCCACAGATGCAGATGGACATGCTACACATGATGAACATGTTTGGTATGATGCCGATGCCCATGTCGTTGATGCATCCAGGTTCGATGATGCCGATGATGATCCCTCCACCAGGAATGGAGCAGGGCATGAAGTCGCCAAGTATGCCAGGAATGCCAGGAATGCCAGGAATGCCACCTACCTCAGTCTCAATGGCAGAACATCAAAAACAACAGATGCAGCAAGCTGCGATTGCTAACCAAAAAAGAGCTAGGACTAGAATTAATGATGAACAACTGAAGGTCCTTCGTGGTTATTTTGACATTAATAATTCCCCAAGCGATGAGCAAATCCAAGCTATGTCAGATCAGACTGGTCTTCCAATAAAGGTGATCAAGCACTGGTTTAGGAATACTCTTTTCAAGGAAAGGCAGAGAAATAAAGATTCTCCATACAACTTCAACAATCCACCTTCAACAACTCTTGACCTGGAGGAATATGAAAGAACTGGAAAACTTCCTCTAACAGTAGAAACACCACCAGCATCGGAAGGTAGCAGTCCAGCCTCCAAACAAGATGAGGTGGAAGTGAGAGATGTGAAAAAAGAATTTGCTGTTGAAACTGTTGAACTGAAACAAGAGTTACCAATTGCGTCTACTCTACAGAAATCTGAACCAGTGAAGGATCAAAATCCGTGTCCTGTGCCAAGCCCTGTCATCACTCCAGCTTTGAATCCAACTTCAAATCCTACATCAAATCCAGCTTCAAATCCACTTACCGATCCAGAATCGACTCTCGCCCCCAATCCAATATCAAATCCACATCGGGAACCTAGTCCAATCCCTACATCGACTGTGA

Transcript

Conbi11518

Protein

Conbi11518

MDHTCAANKGVEKGRINVSKLPEKNSKDLSDVESFDGKIVYNPDGSAYIIEGDSDSDLDSIIDLPQKEGVIIDRRGMTGETSKRLIPPINNAFFVPRNPSLLVNSMYVIPQKQQTPIMHSYRVYDLRSGKPNSQTSGESDAKNSTLSSSHSDLPSTSVSSSLDLSSSHVTTVPTKPILMCFICKLSFGFAKSFMSHANTEHSMILTAEENEVMSQKLSSAIIQGIGKDKDPLMSFLEPIKSSVNSSVKLPKLQISKDIESESSTSASKPFLPPLPSPLGHKPGFYGVCEEHPNGRVQGVECPNCDMVLGSSQSLGGHMTMMHSRNSCKTLKCPKCNWHYKYQETLEIHMKEKHPDSDQKCMYCLTNQSHPRLARGESYSCGYKPYRCEVCNYSTTTKGNLSIHMQSDKHLNNVQELANGGGEMKMPQQLPPPPPPQQPPPTPPITQSKTPPHQQLNQQQQQQSLSDSLQKNKQNKPKPTWRCDVCNYETNVARNLRIHMTSEKHTHNMMVLQQNMKHMQRDMQLHQLNQFAMLQQDPSFLGLAGPIPGGVTFPYDGSLIMGGIPQGFGEAPMDLTKENGIGPGPMGSDTLPDVSRLYQCCVCNIYGTDSLESMHQHLQLDRTKQHEHDNIVISNGTYMCNLCQYKTNLKANFQLHCKTDKHLQRLQLLNHIKEGGDDNEWRLKYLNVSNPVQVRCNACDYYTNSIHKLQIHTGNPRHEASGQIFCHLQLQVAKFPAGADKYYQCSLCKFNARSKLGLMQHVHSMQHLHSESVKQLEMKETGQLEIDIGDIFVVKEIHDTDSVKVKPHHDKMNKMKIVLLTHHNAHPCHQESICLPSSSTIYTFMRTFFGSVSKFSLMCSLTKTIIRIHRTASCPLCQEPLPDRSSIEAHLTAVHSVTSEGLHKLLLLVDEPRLAMPPTTMKELLPGPQATLAEITIDLASLSDKDIEEQFRCQTCSKAFTNIDQLYAHQNELGHLELKQTPRGPGYLCWKKGCNQYFKTATALQMHFREIHAKRPNLTSMDKSLYKYQCSQCTLAFRLPEKLQIHTQIHLIKAALACSFCSKSFQSIANLKIHVQVTHDLSEEDLEQYNDKVSANAMVLATLIGNSGLSKVFSFSENGSGSNDKDGMDMEVDDVDNIPDSEDSSSKGSSSSSTPISMENGIDKNCNSLDGLDKDSVNDLDSKEQQFFEDYVNSQAMAENSYEDPARKFKCHRCRVAFTRQNYLTAHNKTMMHRKGDRLSYPMEKYLDPNRPYKCDVCKESFTQKNILLVHYNSVSHLHKMKQVSQSSTSPTPSSNVSFSSTTHTSIANSTPSTATMPSLEKVNSKRRDYSPEDDTLRPYKCNICKVAYSQGSTLDIHIRSVAHQTKASKLHELAMTGEVDLTRPLIEEPVDPQKTAQAQQQKLIAEIISKQTSEAMSQQSMLFQGLPGFPGLPSVTGVPLLPGVPPLLPMSLPMSLPMSIPSNVFSSAANLVGSSSHTASSSTASANSTVSSKPPTESSSLSANKSLEKISQQLKVSQSHNTGPVLEPSTPQSQINLSGNIQVCSHCCAVFASTEAFAQHQAYCSGGFVSPTSTAFGAVSQSGSQTPEVPRPREFSGRVKAQVHRNLLQNYGFECVMQFNEFDQPCRLHEADEISNPGHCDNPGSPKNPGNPVDELKEDPENPGSDSEKIAATKEVKEKTQLDLPEMNKCACAVCGKAFSSVWVLKSHEEEVHQDIVPTDVVEDIGDQFKADFEKRIPKLELEFPLPSAAVPVVLAATVTPTKEVAETMVKQEMPPPPPPPPPQMQMDMLHMMNMFGMMPMPMSLMHPGSMMPMMIPPPGMEQGMKSPSMPGMPGMPGMPPTSVSMAEHQKQQMQQAAIANQKRARTRINDEQLKVLRGYFDINNSPSDEQIQAMSDQTGLPIKVIKHWFRNTLFKERQRNKDSPYNFNNPPSTTLDLEEYERTGKLPLTVETPPASEGSSPASKQDEVEVRDVKKEFAVETVELKQELPIASTLQKSEPVKDQNPCPVPSPVITPALNPTSNPTSNPASNPLTDPESTLAPNPISNPHREPSPIPTSTV

Gene family

Gene family	Subfamily
Transcription Factors Family	Homeobox
Transcription Factors Family	zf-C2H2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR003604	Domain	Matrin/U1-C-like, C2H2-type zinc finger	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR017970	Conserved_site	Homeobox, conserved site	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR051968	Family	Zinc finger homeobox transcription regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45891	ZINC FINGER HOMEOBOX PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-