Gene detail

Detailed information of Conbi08504 in Conchocele bisecta Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Conbi08504	ANKYRIN REPEAT PROTEIN	LG7	35907745	35910066	-

Gene Structure

More details in Jbrowse Sequence

CDS

Conbi08504

ATGTGTCTCCTGACAATAATACGAGAGCTACTTTCAAATGGCGCAAGAATGGACATAGTAGATAACAAGGGGGACTATCCAATACACGAGTGTGCTAACAAATTATATTTGCATGAAGATGGTGATATGTCGGAATTTGTCACATTACTCTTGACACCGGAATACGGGACTCTAAAAGATTCAAAAGGCAGGACGGCTCTGCATATTGCTGCCGAAAGTCGCATTAAATCGATTGTTGAAATTATAACAAAACAGTGTGTGTGTATTAATGAAAGCGATAATTTTGGAAGGACTCCATTACACTATGCGGCGCTAAACAAAGATAACACTGGTGTTATTATGTGTCTCGTTACAAATGACGCTATGGTTAATGCGGTGGATGTGTGGGGACAGACGGCTTTACATTATGCTGTTAGCATTGAAAATACAGATGCTGTTGTACATCTGTTGAAATCCAATTCTGATGTTAATTTAAAAGACATAACTGGTGTTACACCTCTCCATGTCGCTTGTTTGAACAATTCTATTATTTCCGTTGAACATTTGCTGTCAAATGCGGCAGATATAACATCATTGGACAATAATCGGTCATCCCCTCTCCATTTTGCAGCATGGAATGACAACACAATAGAAGACCTTGCCACATTAATGTTAGATCGCGGTGCAGACATTACTCAACACGATGCGCTAGGCCAGACTTGCATAGATATCGCTATACTCAGACGGAACACTGGTTTGCATTCCATCCTCATGAACCACATTGATGTCTTAGAGGAAGAAAGTACTGAACAACACATCAACGAGTTATCTAATGTTGGGAATAAGCTATTGAAATCAAACGAGGTCGTTGAATTAATTATTTCAGAGAAAGGCTTAAAAAGATCGATGCCTGACGCTAGAGGGTTTGTGTCCGAACTATTAACCATTCCCGGACTTGGACGAGGGACAGACGAAGACGAGGCGAGGGAAATTCAACTAGCGATAGAGGGAATGATGCAAACACTGGCTGAAAGGATTGGACACGTGGACCCGCGTTTCAAATGTGTTGTCTTGCATGCAGGGAGTACATCAGAAGGCACCAAAACGAGATTTCCAGATGAGTTCGATTTCATGTTTTGTCTAGAAGAATTCAGCAAACACTGTGAGCCCATATTTCTGAATGCAGACACTGCGGACGCAAAGGAACTGTGTATTCCAATTAAAGCAAAGCGTGAATTCCATACACTGAACGAGATTGTGGAGAATGATGTTCCGACAGAAAGTCAGCATTCTATATCAGATTACGTGCAAATGATGATCAAGACCACACCAGAATCAGAACCATACTTAAACTTTTCTTGTTCAACTACTATGACATGTCACAAAATGTCCTGTGGGTTTACCGAATTACTGACGACAGCTCTGTTTAGCCCGACTTTCCCAGTGCACCCACGACTTATGCCTATAGAAATCACAACAGATCCCACATTAACGCTGCGATGGAGGGGTTCTAGGTACAAGCATCTGGATATAGACATCGATATCGTGCCCGCTATTCTACTGCCGAATTGGCCGGAACAGACTCGTAAAGACTCGGTTCTCTTGACTTCAGATATGTTGCGGCTCCCATGCGTGGCCGTGCCGAAGATGACAGCGGGTGGCGAGATAGAGTTGTGGCGGTGTTCATTGGCTCTCACAGAAACCGCGATATTCAGACAGCTCCGTGCGGAAATCAGAAACAGCTACATCGCGTGTAAGGCATTCGTCACGTGTAACATTCTTCCGATGATAAATTTTGAAAATGAAAATTATGAGGAAGAACAACTTTTTTACAAACTTACACAAGGGAGCATGTCCTCAGAAGATGAAATCGAAGTGTTTGAGAATGCAGAAAATCTCATACCGTCATATATACTAAAGATGTCATTCTTGAGCGCTGTGGAGGAAAGAGCAAAGCGCGATGGTTTGGGAAGTGTGTATCTACCGCAGTCACAGGATTGTACGGACGGCGAAAAGTCAGAATTTGACACCACTCTAGGAATGTCCAGTGAAACTCGTACAAGTCACTCTGATGGATGCGAAGCGGGACCAATGCTCGGTGTTGAAGATAATCCAACCATATATTACGGACCGGCAACGACGATGAATGTTGCTGAGCGGTGTGTTGAGTTTGATTTAGAATTAGTGAAGGAGGTGTTCCGTAGGTGCGACGAAGGAGTTACCAATAAATTTGTGCCATCCGTGTTTAACTTAAAGCACAATGTCTTGGGAAACGAACTGATGTCTGGTGGCGTAGAAAAGGTCGAATTGTTCATAAAAATAATAAGAAATTTGTTAGACTGA

Transcript

Conbi08504

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00023	Ank	Ankyrin repeat	Repeat	Interproscan
PF03281	Mab-21	Mab-21 protein nucleotidyltransferase domain	Domain	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR046903	Domain	Mab-21-like, nucleotidyltransferase domain	Interproscan
IPR050663	Family	Ankyrin Repeat and SOCS Box	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24193	ANKYRIN REPEAT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-